Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Ufm1-202ENSMUST00000122330 637 ntTSL 2 BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.91
Sdc1P18828 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm23167-201ENSMUST00000157155 103 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm25271-201ENSMUST00000157273 290 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm25433-201ENSMUST00000158283 286 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm23198-201ENSMUST00000158811 91 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm8902-201ENSMUST00000174341 1096 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Mir5110-201ENSMUST00000175537 87 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Snord92-201ENSMUST00000175548 85 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
Sdc1P18828 Mir6343-201ENSMUST00000183584 84 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm27477-201ENSMUST00000184649 143 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm8641-201ENSMUST00000186995 826 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.15□□□□□ -1.91
Sdc1P18828 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm18303-201ENSMUST00000190055 1176 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm28155-201ENSMUST00000191066 151 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC3.15□□□□□ -1.91
Sdc1P18828 Ighv1-27-201ENSMUST00000194473 340 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm38093-201ENSMUST00000195210 710 ntTSL 3 BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm37575-201ENSMUST00000195467 309 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm4248-201ENSMUST00000196905 316 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm17937-201ENSMUST00000197908 742 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm43848-201ENSMUST00000198060 1247 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm43945-201ENSMUST00000203595 754 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm8035-201ENSMUST00000204625 687 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm45228-201ENSMUST00000206585 352 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm45409-201ENSMUST00000211486 252 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Trdn-202ENSMUST00000217779 1182 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Sdc1P18828 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.15□□□□□ -1.91
Sdc1P18828 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 AC158523.2-201ENSMUST00000222708 548 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 AC154806.4-201ENSMUST00000227406 439 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Olfr1031-201ENSMUST00000050942 1011 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sdc1P18828 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC3.15□□□□□ -1.91
Sdc1P18828 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm24611-201ENSMUST00000083272 107 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm10242-201ENSMUST00000090064 330 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm45577-201ENSMUST00000210206 2287 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Sdc1P18828 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
Sdc1P18828 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Sdc1P18828 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Sdc1P18828 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.15□□□□□ -1.91
Sdc1P18828 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc1P18828 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Sdc1P18828 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.14□□□□□ -1.91
Sdc1P18828 Mir19b-1-201ENSMUST00000102301 87 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc1P18828 Gm11878-201ENSMUST00000117908 400 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm15244-201ENSMUST00000121122 130 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm7618-201ENSMUST00000121643 171 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm12591-201ENSMUST00000122407 1177 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm25179-201ENSMUST00000122632 128 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC3.14□□□□□ -1.91
Sdc1P18828 Gm24014-201ENSMUST00000157728 157 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm24217-201ENSMUST00000158260 133 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm25264-201ENSMUST00000158519 117 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm17204-201ENSMUST00000167936 478 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm26318-201ENSMUST00000176507 96 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm3259-205ENSMUST00000185432 1077 ntTSL 3 BASIC3.14□□□□□ -1.91
Sdc1P18828 Gm29513-201ENSMUST00000185741 202 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm6947-201ENSMUST00000186254 78 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm6501-201ENSMUST00000187178 916 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm38329-201ENSMUST00000193473 427 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.14□□□□□ -1.91
Sdc1P18828 Gm43237-201ENSMUST00000196835 1044 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm43712-201ENSMUST00000198020 291 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm43018-201ENSMUST00000198075 1275 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Gm34091-201ENSMUST00000200875 604 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.14□□□□□ -1.91
Sdc1P18828 Gm45458-201ENSMUST00000209900 522 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Pln-204ENSMUST00000219491 771 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Sdc1P18828 Gm20368-201ENSMUST00000220716 301 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC3.14□□□□□ -1.91
Sdc1P18828 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 AC140209.1-201ENSMUST00000227875 284 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Vmn1r28-203ENSMUST00000228678 909 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Sdc1P18828 Gm8074-201ENSMUST00000095071 252 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Zfp850-201ENSMUST00000099111 941 ntBASIC3.14□□□□□ -1.91
Sdc1P18828 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc1P18828 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Sdc1P18828 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Sdc1P18828 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Sdc1P18828 Trim30d-202ENSMUST00000071069 3282 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Sdc1P18828 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms