Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm35857-201ENSMUST00000212739 178 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm18016-201ENSMUST00000216119 801 ntBASIC5.81□□□□□ -1.48
Msx1P13297 AC163357.1-201ENSMUST00000220847 233 ntBASIC5.81□□□□□ -1.48
Msx1P13297 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.81□□□□□ -1.48
Msx1P13297 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.81□□□□□ -1.48
Msx1P13297 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msx1P13297 Gm4987-201ENSMUST00000078326 408 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
Msx1P13297 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Gm43333-201ENSMUST00000198340 2262 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm11290-204ENSMUST00000224688 3042 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msx1P13297 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx1P13297 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
Msx1P13297 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Msx1P13297 Golph3l-201ENSMUST00000060323 2652 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx1P13297 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx1P13297 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Msx1P13297 Gm23142-201ENSMUST00000101848 105 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm26240-201ENSMUST00000101893 105 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm23705-201ENSMUST00000104370 130 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm12118-201ENSMUST00000119766 532 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm7931-201ENSMUST00000121537 271 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm11679-201ENSMUST00000121830 779 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm27723-201ENSMUST00000157398 63 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm25714-201ENSMUST00000158626 296 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm24675-201ENSMUST00000158757 259 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm25445-201ENSMUST00000158996 299 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx1P13297 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Mir3090-201ENSMUST00000175597 87 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Mir6336-201ENSMUST00000183581 130 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm29352-201ENSMUST00000188054 544 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.8□□□□□ -1.48
Msx1P13297 AC123832.2-201ENSMUST00000215151 129 ntBASIC5.8□□□□□ -1.48
Msx1P13297 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.8□□□□□ -1.48
Msx1P13297 AC163743.1-201ENSMUST00000224309 270 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm25515-201ENSMUST00000083858 157 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Msx1P13297 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.8□□□□□ -1.48
Msx1P13297 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx1P13297 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Msx1P13297 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC5.8□□□□□ -1.48
Msx1P13297 Pde10a-208ENSMUST00000115724 3612 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
Msx1P13297 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.8□□□□□ -1.48
Msx1P13297 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
Msx1P13297 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Msx1P13297 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msx1P13297 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msx1P13297 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.79□□□□□ -1.48
Msx1P13297 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Msx1P13297 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 AC107645.1-201ENSMUST00000228660 1810 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Msx1P13297 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Msx1P13297 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Gm4954-201ENSMUST00000135069 1601 ntBASIC5.79□□□□□ -1.48
Msx1P13297 n-R5s202-201ENSMUST00000104517 114 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Msx1P13297 Gm13338-201ENSMUST00000120235 361 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Gm6062-201ENSMUST00000120462 631 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Gng2-ps1-201ENSMUST00000120523 217 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Gm12094-201ENSMUST00000121781 472 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Gm22337-201ENSMUST00000157721 132 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.79□□□□□ -1.48
Msx1P13297 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.79□□□□□ -1.48
Msx1P13297 Gm4845-201ENSMUST00000179202 562 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Gm28353-201ENSMUST00000186482 570 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Gm28533-201ENSMUST00000186741 570 ntBASIC5.79□□□□□ -1.48
Msx1P13297 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Msx1P13297 Gm28288-201ENSMUST00000191019 214 ntBASIC5.79□□□□□ -1.48
Msx1P13297 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.79□□□□□ -1.48
Msx1P13297 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC5.79□□□□□ -1.48
Msx1P13297 AC138284.5-201ENSMUST00000214389 652 ntBASIC5.79□□□□□ -1.48
Msx1P13297 Gm18618-201ENSMUST00000222211 473 ntBASIC5.79□□□□□ -1.48
Msx1P13297 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms