Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm29407-201ENSMUST00000191468 696 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC5.77□□□□□ -1.49
RaraP11416 Gm42832-201ENSMUST00000196361 745 ntBASIC5.77□□□□□ -1.49
RaraP11416 Igkv4-75-201ENSMUST00000197204 359 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.77□□□□□ -1.49
RaraP11416 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC5.77□□□□□ -1.49
RaraP11416 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC5.77□□□□□ -1.49
RaraP11416 Gm8158-201ENSMUST00000219220 465 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm8249-201ENSMUST00000219225 465 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm8112-201ENSMUST00000219637 465 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 AC121966.1-201ENSMUST00000221458 282 ntBASIC5.77□□□□□ -1.49
RaraP11416 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.77□□□□□ -1.49
RaraP11416 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.77□□□□□ -1.49
RaraP11416 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.77□□□□□ -1.49
RaraP11416 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.77□□□□□ -1.49
RaraP11416 AC114572.1-201ENSMUST00000227262 300 ntBASIC5.77□□□□□ -1.49
RaraP11416 Olfr123-201ENSMUST00000054748 930 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RaraP11416 Gm10061-201ENSMUST00000073111 465 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RaraP11416 Gm23927-201ENSMUST00000082466 215 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm22829-201ENSMUST00000083771 106 ntBASIC5.77□□□□□ -1.49
RaraP11416 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
RaraP11416 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
RaraP11416 Gm38065-201ENSMUST00000193147 3492 ntBASIC5.77□□□□□ -1.49
RaraP11416 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 AC154627.2-201ENSMUST00000227028 4669 ntBASIC5.77□□□□□ -1.49
RaraP11416 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.76□□□□□ -1.49
RaraP11416 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RaraP11416 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
RaraP11416 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RaraP11416 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RaraP11416 Gm11970-201ENSMUST00000116105 320 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm13064-201ENSMUST00000119125 557 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm9043-201ENSMUST00000119677 314 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm7363-201ENSMUST00000119883 399 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm26372-201ENSMUST00000157831 236 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm26489-201ENSMUST00000157880 264 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm25459-201ENSMUST00000157953 114 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm22839-201ENSMUST00000158436 304 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm27849-201ENSMUST00000183673 125 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm27402-201ENSMUST00000183890 120 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC5.76□□□□□ -1.49
RaraP11416 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.76□□□□□ -1.49
RaraP11416 Rhox7-ps2-201ENSMUST00000197804 322 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm2623-201ENSMUST00000199229 286 ntBASIC5.76□□□□□ -1.49
RaraP11416 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC5.76□□□□□ -1.49
RaraP11416 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.76□□□□□ -1.49
RaraP11416 AC093926.1-201ENSMUST00000213730 243 ntBASIC5.76□□□□□ -1.49
RaraP11416 Gm18587-201ENSMUST00000213736 841 ntBASIC5.76□□□□□ -1.49
RaraP11416 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.76□□□□□ -1.49
RaraP11416 AC160031.1-201ENSMUST00000219914 522 ntBASIC5.76□□□□□ -1.49
RaraP11416 AC123705.4-202ENSMUST00000221602 697 ntTSL 2 BASIC5.76□□□□□ -1.49
RaraP11416 Gm7822-201ENSMUST00000222433 581 ntBASIC5.76□□□□□ -1.49
RaraP11416 AC120553.1-201ENSMUST00000227313 260 ntBASIC5.76□□□□□ -1.49
RaraP11416 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RaraP11416 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RaraP11416 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RaraP11416 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RaraP11416 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
RaraP11416 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RaraP11416 Gm37217-201ENSMUST00000194017 3521 ntBASIC5.76□□□□□ -1.49
RaraP11416 Dnase2b-202ENSMUST00000200633 2685 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RaraP11416 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RaraP11416 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.76□□□□□ -1.49
RaraP11416 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
RaraP11416 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
RaraP11416 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RaraP11416 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RaraP11416 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.75□□□□□ -1.49
RaraP11416 Olfr1279-203ENSMUST00000216697 3385 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
RaraP11416 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RaraP11416 Gm22676-201ENSMUST00000116972 129 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm13510-201ENSMUST00000118659 429 ntBASIC5.75□□□□□ -1.49
RaraP11416 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm11761-201ENSMUST00000121392 445 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.75□□□□□ -1.49
RaraP11416 Gm13905-201ENSMUST00000140009 579 ntTSL 3 BASIC5.75□□□□□ -1.49
RaraP11416 Gm25445-201ENSMUST00000158996 299 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC5.75□□□□□ -1.49
RaraP11416 Mir3066-201ENSMUST00000175296 83 ntBASIC5.75□□□□□ -1.49
RaraP11416 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.75□□□□□ -1.49
RaraP11416 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.75□□□□□ -1.49
RaraP11416 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
RaraP11416 Gm27820-201ENSMUST00000183628 175 ntBASIC5.75□□□□□ -1.49
RaraP11416 Mir7072-201ENSMUST00000184542 60 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms