Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gm6474-201ENSMUST00000223250 699 ntBASIC4.11□□□□□ -1.75
Shisa8J3QNX5 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.11□□□□□ -1.75
Shisa8J3QNX5 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.11□□□□□ -1.75
Shisa8J3QNX5 AC144628.1-201ENSMUST00000227943 466 ntBASIC4.11□□□□□ -1.75
Shisa8J3QNX5 AC144798.1-201ENSMUST00000228120 391 ntBASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Gm22741-201ENSMUST00000083438 165 ntBASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Ptprc-203ENSMUST00000182283 4702 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Gm5662-201ENSMUST00000101168 1840 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Shisa8J3QNX5 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm42704-201ENSMUST00000196875 1778 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm23709-201ENSMUST00000104364 130 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Lipe-203ENSMUST00000105177 1251 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm15382-201ENSMUST00000118011 537 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm12571-201ENSMUST00000118132 243 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm11881-201ENSMUST00000119408 572 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Mup-ps22-201ENSMUST00000121611 243 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm22080-201ENSMUST00000157591 106 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm22733-201ENSMUST00000158094 91 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm9613-201ENSMUST00000171662 196 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm20612-201ENSMUST00000176318 236 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm25873-201ENSMUST00000180317 107 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Mir6343-201ENSMUST00000183584 84 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm27428-201ENSMUST00000184289 110 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm28263-201ENSMUST00000185884 400 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm37636-201ENSMUST00000193583 359 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm43586-201ENSMUST00000195948 310 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm43487-201ENSMUST00000200331 1031 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 AC156560.1-201ENSMUST00000221425 256 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm17915-201ENSMUST00000222077 548 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Olfr1022-201ENSMUST00000054736 948 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Olfr996-201ENSMUST00000077075 1068 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm23796-201ENSMUST00000084011 160 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm37393-201ENSMUST00000195118 3870 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm38278-201ENSMUST00000194715 1365 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm336-201ENSMUST00000186376 1480 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
Shisa8J3QNX5 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.75
Shisa8J3QNX5 Gm13088-201ENSMUST00000105771 1819 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Shisa8J3QNX5 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.09□□□□□ -1.75
Shisa8J3QNX5 C2cd6-201ENSMUST00000097080 2131 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
Shisa8J3QNX5 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.09□□□□□ -1.75
Shisa8J3QNX5 Gm43313-201ENSMUST00000201398 2235 ntBASIC4.09□□□□□ -1.75
Shisa8J3QNX5 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
Shisa8J3QNX5 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC4.09□□□□□ -1.75
Shisa8J3QNX5 Vmn1r173-202ENSMUST00000226233 9416 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Shisa8J3QNX5 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
Shisa8J3QNX5 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
Shisa8J3QNX5 Gm24430-201ENSMUST00000104077 104 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms