Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Gm26563-202ENSMUST00000181152 1931 ntTSL 5 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Dgkk-201ENSMUST00000067410 7155 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Gm45264-201ENSMUST00000210090 3995 ntBASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Gm19498-201ENSMUST00000191128 331 ntBASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 AC211878.5-201ENSMUST00000221697 409 ntBASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 AC119573.1-201ENSMUST00000227960 757 ntBASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.33□□□□□ -1.88
Col6a3E9PWQ3 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm5396-201ENSMUST00000121222 532 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm25069-201ENSMUST00000175238 86 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm44212-201ENSMUST00000205016 897 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm45150-201ENSMUST00000206051 467 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm7588-201ENSMUST00000216866 571 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm43844-201ENSMUST00000202926 5605 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm44530-201ENSMUST00000207920 3559 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm24601-201ENSMUST00000157970 143 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Trbv10-201ENSMUST00000168322 289 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm8423-201ENSMUST00000211387 607 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm37964-201ENSMUST00000192459 4905 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm14333-201ENSMUST00000130484 264 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm27379-201ENSMUST00000183730 123 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm6947-201ENSMUST00000186254 78 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm37030-201ENSMUST00000194254 295 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm37353-201ENSMUST00000194497 313 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Ighv1-1-201ENSMUST00000194912 291 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Gm5175-202ENSMUST00000219699 529 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 AC134335.1-201ENSMUST00000227626 329 ntBASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col6a3E9PWQ3 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm24441-201ENSMUST00000157235 281 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm37698-201ENSMUST00000192605 463 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm45551-201ENSMUST00000211459 928 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Mir669d-201ENSMUST00000104644 121 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm3370-201ENSMUST00000171785 500 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Mir7226-201ENSMUST00000184953 60 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Sult2a7-202ENSMUST00000209744 792 ntTSL 5 BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm19074-201ENSMUST00000218915 1429 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm26866-201ENSMUST00000180414 802 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm28466-201ENSMUST00000190678 659 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Gm22979-201ENSMUST00000082609 159 ntBASIC3.31□□□□□ -1.88
Col6a3E9PWQ3 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 CT025535.2-201ENSMUST00000228572 7441 ntBASIC3.3□□□□□ -1.88
Col6a3E9PWQ3 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms