Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
Vps28Q9D1C8 Gm21033-201ENSMUST00000208590 2608 ntBASIC4.4□□□□□ -1.7
Vps28Q9D1C8 Gm9343-201ENSMUST00000209016 2609 ntBASIC4.4□□□□□ -1.7
Vps28Q9D1C8 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm11488-201ENSMUST00000117277 863 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm13550-201ENSMUST00000118185 525 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm9078-201ENSMUST00000119126 617 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm12994-201ENSMUST00000119601 447 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm12087-201ENSMUST00000121878 258 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm28786-201ENSMUST00000187228 172 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm18602-201ENSMUST00000209794 851 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 AC161520.1-201ENSMUST00000210954 939 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm18644-201ENSMUST00000211458 815 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 AC156952.1-201ENSMUST00000220361 793 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Gm45223-201ENSMUST00000207037 5138 ntBASIC4.4□□□□□ -1.71
Vps28Q9D1C8 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm20541-201ENSMUST00000173035 1406 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm24125-201ENSMUST00000104105 137 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm15426-201ENSMUST00000117823 556 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm11408-201ENSMUST00000117889 519 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm13064-201ENSMUST00000119125 557 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm15923-201ENSMUST00000119300 1169 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm11252-201ENSMUST00000120572 939 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm12383-201ENSMUST00000120628 760 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm14916-201ENSMUST00000121904 204 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm23905-201ENSMUST00000157568 109 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm24289-201ENSMUST00000157629 135 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm3851-201ENSMUST00000168653 318 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm28615-201ENSMUST00000187527 482 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm44348-201ENSMUST00000200165 122 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm45434-201ENSMUST00000210550 293 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm45735-201ENSMUST00000212779 319 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 AC153968.2-201ENSMUST00000215579 1140 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 AC153516.1-201ENSMUST00000217955 779 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm3565-201ENSMUST00000222670 609 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 AC147639.1-201ENSMUST00000224216 661 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 AC160958.1-201ENSMUST00000224833 368 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 AC121960.3-201ENSMUST00000227077 623 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm24254-201ENSMUST00000083702 104 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Vps28Q9D1C8 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Vps28Q9D1C8 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Cnot6l-202ENSMUST00000113005 3170 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm12190-201ENSMUST00000120001 187 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm9001-201ENSMUST00000121642 399 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm22378-201ENSMUST00000157481 111 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm17655-201ENSMUST00000167969 255 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm20773-201ENSMUST00000178940 681 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm28997-201ENSMUST00000188759 429 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm44349-201ENSMUST00000197048 123 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Igkv13-82-201ENSMUST00000200308 346 ntBASIC4.38□□□□□ -1.71
Vps28Q9D1C8 Gm44634-201ENSMUST00000206119 152 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms