Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm24829-201ENSMUST00000179245 92 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm27676-201ENSMUST00000183669 61 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Mir7235-201ENSMUST00000183796 56 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm27551-201ENSMUST00000184258 77 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm28655-201ENSMUST00000191538 692 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm7182-201ENSMUST00000193351 732 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Igkv2-107-201ENSMUST00000196000 313 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm18635-201ENSMUST00000199020 1060 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm2314-201ENSMUST00000200391 586 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm9655-201ENSMUST00000211321 1284 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm19170-201ENSMUST00000212440 1084 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm18488-201ENSMUST00000215082 364 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 AC132384.9-201ENSMUST00000218085 277 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm2446-201ENSMUST00000220144 772 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Gm22423-201ENSMUST00000082861 184 ntBASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Ddx56Q9D0R4 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm3623-201ENSMUST00000173643 2747 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm38699-201ENSMUST00000221301 1740 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm13321-201ENSMUST00000117101 400 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm13491-201ENSMUST00000118267 235 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm14669-201ENSMUST00000118841 250 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm9078-201ENSMUST00000119126 617 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm14175-201ENSMUST00000119835 241 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm16254-201ENSMUST00000131528 730 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm24402-201ENSMUST00000157873 91 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm27733-201ENSMUST00000184803 68 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm28061-201ENSMUST00000189085 807 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm42850-201ENSMUST00000202094 201 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm45226-201ENSMUST00000206602 288 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 AC161456.1-201ENSMUST00000206771 887 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm42910-201ENSMUST00000198917 2921 ntBASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Ddx56Q9D0R4 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 BC051076-202ENSMUST00000199477 2868 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm4853-201ENSMUST00000119359 394 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm14887-201ENSMUST00000119522 663 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm12237-201ENSMUST00000120158 470 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm14739-201ENSMUST00000120424 802 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm2020-201ENSMUST00000145242 579 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm23171-201ENSMUST00000157159 264 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm22940-201ENSMUST00000158560 155 ntBASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Ddx56Q9D0R4 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms