Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Gm43227-201ENSMUST00000202239 677 ntBASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Gm36371-201ENSMUST00000209043 1103 ntBASIC3.33□□□□□ -1.88
Cdh23Q99PF4 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cdh23Q99PF4 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Cdh23Q99PF4 Gm24914-201ENSMUST00000157285 313 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm19620-201ENSMUST00000195972 434 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm9427-201ENSMUST00000116187 651 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm14627-201ENSMUST00000118931 567 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm3757-201ENSMUST00000125878 675 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm24816-201ENSMUST00000175311 151 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm2987-201ENSMUST00000187673 1693 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm13924-201ENSMUST00000119899 486 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm22968-201ENSMUST00000157955 118 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Gm5066-201ENSMUST00000188479 822 ntBASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Cdh23Q99PF4 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Gm13064-201ENSMUST00000119125 557 ntBASIC3.31□□□□□ -1.88
Cdh23Q99PF4 AC164116.2-201ENSMUST00000225398 1038 ntBASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Gm25967-201ENSMUST00000157168 147 ntBASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Gm20826-201ENSMUST00000179256 758 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Tex36-201ENSMUST00000033275 958 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Fryl-201ENSMUST00000094700 9852 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.31□□□□□ -1.88
Cdh23Q99PF4 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.31□□□□□ -1.88
Cdh23Q99PF4 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Gm29038-201ENSMUST00000191543 678 ntBASIC3.3□□□□□ -1.88
Cdh23Q99PF4 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Gm336-201ENSMUST00000186376 1480 ntBASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Gm12787-201ENSMUST00000119234 396 ntBASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Sbno1-201ENSMUST00000065263 10071 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC3.3□□□□□ -1.88
Cdh23Q99PF4 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm14810-201ENSMUST00000121628 486 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm23671-201ENSMUST00000157472 103 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm6075-201ENSMUST00000186816 486 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Olfr984-203ENSMUST00000214856 5025 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm18913-201ENSMUST00000204311 1789 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 C130023A14Rik-201ENSMUST00000193537 3087 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm22782-201ENSMUST00000104082 132 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm5943-201ENSMUST00000119458 459 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm26477-201ENSMUST00000122617 323 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm18617-201ENSMUST00000222311 259 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm28240-201ENSMUST00000187560 2053 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm11881-201ENSMUST00000119408 572 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm25808-201ENSMUST00000122784 284 ntBASIC3.29□□□□□ -1.88
Cdh23Q99PF4 Gm22651-201ENSMUST00000157872 94 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms