Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm27233-201ENSMUST00000184030 307 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm8939-201ENSMUST00000192577 964 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm43723-201ENSMUST00000196886 189 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm44794-201ENSMUST00000206550 411 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Clp1Q99LI9 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm25792-201ENSMUST00000083289 100 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm38257-201ENSMUST00000195881 2761 ntBASIC5.85□□□□□ -1.47
Clp1Q99LI9 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Clp1Q99LI9 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Copg2-201ENSMUST00000048774 3961 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clp1Q99LI9 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm15975-201ENSMUST00000122385 1402 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm16513-202ENSMUST00000201663 2485 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Il7r-201ENSMUST00000003981 3540 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm14874-201ENSMUST00000118995 438 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm7219-201ENSMUST00000119619 297 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm15120-201ENSMUST00000120602 301 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm14926-201ENSMUST00000120650 508 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm16345-201ENSMUST00000146065 158 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm24240-201ENSMUST00000157785 135 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm8532-201ENSMUST00000179174 461 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm11395-201ENSMUST00000181011 499 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm11394-201ENSMUST00000181421 517 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm7858-201ENSMUST00000190177 622 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm5731-201ENSMUST00000190969 481 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm37336-202ENSMUST00000193705 468 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm37743-201ENSMUST00000194645 376 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm19147-201ENSMUST00000199622 652 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm7751-201ENSMUST00000212868 709 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm20102-201ENSMUST00000222445 220 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Olfr739-201ENSMUST00000075261 930 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Snord15b-201ENSMUST00000083032 145 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.84□□□□□ -1.47
Clp1Q99LI9 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Clp1Q99LI9 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Clp1Q99LI9 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Clp1Q99LI9 Gm37023-201ENSMUST00000192895 2426 ntBASIC5.84□□□□□ -1.48
Clp1Q99LI9 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Clp1Q99LI9 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Clp1Q99LI9 Ifi204-201ENSMUST00000111214 2296 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm37846-201ENSMUST00000191840 3774 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm37880-201ENSMUST00000192216 3257 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm24855-201ENSMUST00000104848 97 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm15670-201ENSMUST00000117740 447 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm15231-201ENSMUST00000119174 447 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm7363-201ENSMUST00000119883 399 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm25176-201ENSMUST00000122640 125 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm11775-201ENSMUST00000136500 773 ntTSL 5 BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm22216-201ENSMUST00000157557 114 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Mir1945-201ENSMUST00000157919 78 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm3470-201ENSMUST00000160819 420 ntBASIC5.83□□□□□ -1.48
Clp1Q99LI9 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Clp1Q99LI9 Gm24100-201ENSMUST00000178592 79 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms