Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm23379-201ENSMUST00000180026 107 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm4842-201ENSMUST00000183237 835 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Mir6391-201ENSMUST00000184391 104 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm27538-201ENSMUST00000185065 294 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm18448-201ENSMUST00000186286 599 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm29545-201ENSMUST00000188878 694 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm8403-201ENSMUST00000189712 1298 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm43232-201ENSMUST00000201346 364 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm43092-201ENSMUST00000202986 1854 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm44402-201ENSMUST00000203677 238 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 AC120540.1-201ENSMUST00000221879 324 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 AC154552.4-201ENSMUST00000222171 151 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm6988-201ENSMUST00000222676 375 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm22829-201ENSMUST00000083771 106 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm22493-201ENSMUST00000104494 132 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm15951-201ENSMUST00000118377 400 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm14688-201ENSMUST00000119169 303 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm4912-201ENSMUST00000122212 1044 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm22601-201ENSMUST00000157595 250 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm22776-201ENSMUST00000178634 94 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm23767-201ENSMUST00000179278 94 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm5974-201ENSMUST00000181607 986 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm28412-201ENSMUST00000187243 177 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm29556-201ENSMUST00000187591 696 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm37836-201ENSMUST00000195875 175 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm31230-201ENSMUST00000199725 785 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm43441-201ENSMUST00000201458 205 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm45651-201ENSMUST00000210857 335 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 AC158807.1-201ENSMUST00000217959 187 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm18557-201ENSMUST00000218710 433 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm23300-201ENSMUST00000082712 125 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm25140-201ENSMUST00000083254 140 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC5.26□□□□□ -1.57
Ushbp1Q8R370 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC5.26□□□□□ -1.57
Ushbp1Q8R370 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm7133-201ENSMUST00000187797 2039 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm45235-201ENSMUST00000208016 4465 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm12112-201ENSMUST00000117772 231 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm14878-201ENSMUST00000118167 293 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm12379-201ENSMUST00000119607 391 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm12067-201ENSMUST00000119755 1148 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm12006-201ENSMUST00000120786 403 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm12045-201ENSMUST00000122122 573 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm6568-201ENSMUST00000122274 697 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm23959-201ENSMUST00000157208 324 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Zakit-201ENSMUST00000157677 308 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm26271-201ENSMUST00000158349 104 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm20657-201ENSMUST00000177079 515 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm8221-201ENSMUST00000178052 564 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Mir6960-201ENSMUST00000183449 61 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm27568-201ENSMUST00000184220 99 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm4557-201ENSMUST00000185826 907 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm4526-201ENSMUST00000186039 920 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm8708-201ENSMUST00000188500 906 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm17953-201ENSMUST00000192061 667 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm42622-201ENSMUST00000197229 355 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm2522-201ENSMUST00000204280 322 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm44634-201ENSMUST00000206119 152 ntBASIC5.25□□□□□ -1.57
Ushbp1Q8R370 Gm44816-201ENSMUST00000206666 477 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms