Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 AC113031.2-201ENSMUST00000226132 579 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 CT030662.1-201ENSMUST00000227380 232 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 AC107453.2-201ENSMUST00000227714 655 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Mir504-201ENSMUST00000093602 79 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Olfr203-202ENSMUST00000215893 1521 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm45577-201ENSMUST00000210206 2287 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Mir190b-201ENSMUST00000104803 80 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm13737-201ENSMUST00000119793 232 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm24517-201ENSMUST00000122560 107 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm5924-201ENSMUST00000132554 871 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm2892-201ENSMUST00000145537 711 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm22519-201ENSMUST00000158270 178 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm29259-201ENSMUST00000186396 694 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm37837-201ENSMUST00000191743 604 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm38261-201ENSMUST00000192608 316 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm8823-201ENSMUST00000193158 433 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm44474-201ENSMUST00000196525 127 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm8069-201ENSMUST00000197887 154 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 AC133189.1-201ENSMUST00000198820 140 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm18327-201ENSMUST00000202426 830 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm43580-201ENSMUST00000202892 284 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm5176-202ENSMUST00000220267 583 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 AC124569.4-201ENSMUST00000223830 1220 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 CT025603.4-201ENSMUST00000225777 413 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm23928-201ENSMUST00000082469 145 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm45854-201ENSMUST00000211857 3488 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Gm32444-201ENSMUST00000195147 3511 ntBASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Vps53Q8CCB4 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm9495-201ENSMUST00000200846 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm11845-201ENSMUST00000117886 327 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm12379-201ENSMUST00000119607 391 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm6806-201ENSMUST00000120092 1006 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm14238-201ENSMUST00000120227 323 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm12044-201ENSMUST00000120335 213 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm13508-201ENSMUST00000121639 775 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Ear-ps7-201ENSMUST00000161287 442 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm5258-201ENSMUST00000165437 327 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm6395-201ENSMUST00000167639 691 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm18406-201ENSMUST00000185872 669 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm42958-201ENSMUST00000197595 318 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm44650-201ENSMUST00000206929 194 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm5338-201ENSMUST00000209530 639 ntBASIC5.19□□□□□ -1.58
Vps53Q8CCB4 Gm18645-201ENSMUST00000209593 651 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms