Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Gm45226-201ENSMUST00000206602 288 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm45316-201ENSMUST00000210128 162 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Calml4-203ENSMUST00000213643 710 ntTSL 2 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 AC151843.1-201ENSMUST00000215960 691 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 AC102575.1-201ENSMUST00000225348 547 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 CT030704.1-201ENSMUST00000227521 699 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 AC137961.1-201ENSMUST00000227924 734 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Snord59a-201ENSMUST00000082844 74 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm37056-201ENSMUST00000192141 1865 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 AC154227.1-201ENSMUST00000228809 2467 ntBASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Usp40Q8BWR4 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm37514-201ENSMUST00000194512 2753 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm37831-201ENSMUST00000191685 1787 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm26156-201ENSMUST00000116999 123 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm13672-201ENSMUST00000117554 459 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm7071-201ENSMUST00000120458 462 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm12222-201ENSMUST00000121368 260 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm15367-201ENSMUST00000122398 1016 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm23789-201ENSMUST00000122536 301 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm24534-201ENSMUST00000157949 291 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm22637-201ENSMUST00000158144 283 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm5929-201ENSMUST00000166883 487 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm16378-201ENSMUST00000179168 342 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm28418-201ENSMUST00000186179 423 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm17777-201ENSMUST00000189740 1276 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm37682-201ENSMUST00000191776 522 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Trav5d-2-201ENSMUST00000196107 275 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Trav5n-2-201ENSMUST00000197136 275 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm43604-201ENSMUST00000199799 705 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm9245-201ENSMUST00000200528 983 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm45434-201ENSMUST00000210550 293 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 AC113031.3-201ENSMUST00000226552 190 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Vmn1r52-201ENSMUST00000079832 930 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 n-R5s85-201ENSMUST00000083453 113 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm15975-201ENSMUST00000122385 1402 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm44433-201ENSMUST00000203540 4832 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Gm13961-201ENSMUST00000119282 4772 ntBASIC6.22□□□□□ -1.41
Usp40Q8BWR4 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Usp40Q8BWR4 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Usp40Q8BWR4 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Usp40Q8BWR4 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm38106-201ENSMUST00000194107 2534 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm11386-201ENSMUST00000117761 347 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm16216-201ENSMUST00000118970 1111 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm14986-201ENSMUST00000121262 1002 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm6031-201ENSMUST00000121314 1054 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm5963-201ENSMUST00000143451 236 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm26347-201ENSMUST00000157526 131 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm23905-201ENSMUST00000157568 109 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm20773-201ENSMUST00000178940 681 ntBASIC6.21□□□□□ -1.42
Usp40Q8BWR4 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms