Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm26404-201ENSMUST00000158498 109 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm9294-201ENSMUST00000165198 789 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Mir466b-4-201ENSMUST00000178801 90 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm25285-201ENSMUST00000178951 90 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Mir466b-6-201ENSMUST00000180061 90 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Mir466c-2-201ENSMUST00000180211 90 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm29754-201ENSMUST00000206269 358 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm18127-201ENSMUST00000208479 725 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm18696-201ENSMUST00000220103 274 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 AC139350.4-201ENSMUST00000228483 798 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm23093-201ENSMUST00000083450 102 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm24522-201ENSMUST00000083964 108 ntBASIC5.94□□□□□ -1.46
Trim56Q80VI1 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Zscan4c-201ENSMUST00000131379 2276 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trim56Q80VI1 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 AC159193.1-201ENSMUST00000222872 2517 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Lrrtm4-202ENSMUST00000126005 3733 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm24715-201ENSMUST00000102377 95 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm11268-201ENSMUST00000118347 267 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm13172-201ENSMUST00000118685 256 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm13007-201ENSMUST00000121866 365 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm24836-201ENSMUST00000122609 108 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm16345-201ENSMUST00000146065 158 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm4487-201ENSMUST00000150617 442 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm25846-201ENSMUST00000158013 135 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm17421-201ENSMUST00000167845 674 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm27037-201ENSMUST00000182270 960 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm27676-201ENSMUST00000183669 61 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm29556-201ENSMUST00000187591 696 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm6929-201ENSMUST00000210930 468 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 AC153961.2-201ENSMUST00000218877 164 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 AC113031.5-201ENSMUST00000227116 606 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm24446-201ENSMUST00000083982 156 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm16261-201ENSMUST00000096813 205 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Fbxw28-201ENSMUST00000112039 1497 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gm20172-201ENSMUST00000193138 1551 ntBASIC5.93□□□□□ -1.46
Trim56Q80VI1 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trim56Q80VI1 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Trim56Q80VI1 Gm3696-201ENSMUST00000167923 1814 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trim56Q80VI1 Olfr970-202ENSMUST00000213975 1630 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trim56Q80VI1 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.92□□□□□ -1.46
Trim56Q80VI1 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.92□□□□□ -1.46
Trim56Q80VI1 Gm37400-201ENSMUST00000193148 3605 ntBASIC5.92□□□□□ -1.46
Trim56Q80VI1 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.92□□□□□ -1.46
Trim56Q80VI1 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Trim56Q80VI1 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 111.9 ms