Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm37441-201ENSMUST00000194430 678 ntBASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Gm37659-201ENSMUST00000194574 111 ntBASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Gm18482-201ENSMUST00000202405 760 ntBASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Gm18228-201ENSMUST00000217297 1091 ntBASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Gm46146-201ENSMUST00000217483 346 ntBASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 AC154329.2-201ENSMUST00000225257 383 ntBASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Gm10042-201ENSMUST00000079884 78 ntBASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Gm5518-201ENSMUST00000084171 648 ntBASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1323-202ENSMUST00000213463 3717 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Gm19074-201ENSMUST00000218915 1429 ntBASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ddx55Q6ZPL9 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Cntnap5b-201ENSMUST00000086738 4027 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm14677-201ENSMUST00000117866 486 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm12607-201ENSMUST00000120724 493 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm12770-201ENSMUST00000121734 462 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm12045-201ENSMUST00000122122 573 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm10444-201ENSMUST00000126708 148 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm23554-201ENSMUST00000157818 110 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm5974-201ENSMUST00000181607 986 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm21232-201ENSMUST00000182187 1006 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm44354-201ENSMUST00000196017 143 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm43556-201ENSMUST00000196186 681 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm42164-201ENSMUST00000198881 379 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm2314-201ENSMUST00000200391 586 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm44002-201ENSMUST00000205134 594 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 AC079644.1-201ENSMUST00000220586 405 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm46996-201ENSMUST00000220924 408 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 1700037F03Rik-201ENSMUST00000223032 365 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 AC102603.1-201ENSMUST00000227481 584 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.2□□□□□ -1.58
Ddx55Q6ZPL9 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Vmn2r77-201ENSMUST00000164996 2565 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm23424-201ENSMUST00000103889 110 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Snora64-201ENSMUST00000104521 134 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm14107-201ENSMUST00000117774 330 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm12825-201ENSMUST00000120249 563 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm14916-201ENSMUST00000121904 204 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm23228-201ENSMUST00000157296 270 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm8161-201ENSMUST00000168739 481 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm23379-201ENSMUST00000180026 107 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm27538-201ENSMUST00000185065 294 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm9775-201ENSMUST00000189402 331 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm28655-201ENSMUST00000191538 692 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.19□□□□□ -1.58
Ddx55Q6ZPL9 Gm18891-201ENSMUST00000216734 1087 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms