Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm18635-201ENSMUST00000199020 1060 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm43730-201ENSMUST00000199863 372 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 AU023762-202ENSMUST00000209716 961 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm23464-201ENSMUST00000083145 147 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm42614-201ENSMUST00000198724 1554 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Olfr1269-203ENSMUST00000216493 3827 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm42484-201ENSMUST00000196075 2104 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm26019-201ENSMUST00000104407 119 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm12697-201ENSMUST00000118008 667 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm6893-201ENSMUST00000118385 522 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm11881-201ENSMUST00000119408 572 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm10444-201ENSMUST00000126708 148 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm25264-201ENSMUST00000158519 117 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Ear-ps10-201ENSMUST00000161871 460 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm17109-201ENSMUST00000163985 358 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm27805-201ENSMUST00000184513 79 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm42990-201ENSMUST00000199231 312 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm43028-201ENSMUST00000202561 481 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm45498-201ENSMUST00000210346 283 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 AC166358.6-201ENSMUST00000221834 1206 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 AC134468.2-201ENSMUST00000222549 672 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 AC126275.1-201ENSMUST00000224881 446 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 AC117814.1-201ENSMUST00000226135 352 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 AC154371.1-201ENSMUST00000226600 412 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 AC074315.1-201ENSMUST00000228801 214 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm7117-201ENSMUST00000071515 387 ntBASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Usp49Q6P9L4 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 AC152162.1-201ENSMUST00000225910 2917 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 AC154184.1-201ENSMUST00000224375 1620 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm26367-201ENSMUST00000104165 132 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm15030-201ENSMUST00000119804 484 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm14506-201ENSMUST00000121165 536 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm5963-201ENSMUST00000143451 236 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm23179-201ENSMUST00000158693 304 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm20689-201ENSMUST00000176033 279 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm27036-201ENSMUST00000182465 980 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm19503-201ENSMUST00000187109 241 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm29263-201ENSMUST00000188718 463 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Olfr1225-201ENSMUST00000188861 1027 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm17954-201ENSMUST00000195893 607 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm42695-201ENSMUST00000199445 818 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Gm18252-203ENSMUST00000215855 757 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.77□□□□□ -1.65
Usp49Q6P9L4 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Usp49Q6P9L4 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 86.3 ms