Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm11890-201ENSMUST00000119585 417 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm5060-201ENSMUST00000120072 599 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm25291-201ENSMUST00000122795 144 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm23233-201ENSMUST00000157301 137 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm25334-201ENSMUST00000158036 110 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm20397-201ENSMUST00000174520 362 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm27781-201ENSMUST00000185185 92 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm28666-201ENSMUST00000186649 274 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm2719-201ENSMUST00000191929 444 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm33973-201ENSMUST00000195148 534 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm43315-201ENSMUST00000198120 313 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm17956-201ENSMUST00000199931 838 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Chaer1-201ENSMUST00000201649 651 ntTSL 5 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm45249-201ENSMUST00000211021 348 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm6474-201ENSMUST00000223250 699 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 CT025579.3-201ENSMUST00000224543 451 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm4963-201ENSMUST00000072718 378 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Snord59a-201ENSMUST00000082844 74 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Gm26206-201ENSMUST00000082908 110 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sh3rf1Q69ZI1 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr635-202ENSMUST00000209473 8565 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm25088-201ENSMUST00000101803 79 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm23691-201ENSMUST00000101878 107 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Snord72-201ENSMUST00000104549 81 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm14744-201ENSMUST00000114039 800 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm12765-201ENSMUST00000117273 615 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm11908-201ENSMUST00000117755 347 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm12235-201ENSMUST00000118596 170 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm11774-201ENSMUST00000118601 293 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm4989-201ENSMUST00000118711 749 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm12053-201ENSMUST00000119022 252 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm14520-201ENSMUST00000119258 387 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm7079-201ENSMUST00000119726 171 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm14472-201ENSMUST00000119815 282 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm15387-201ENSMUST00000120421 648 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm23465-201ENSMUST00000157134 262 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm24692-201ENSMUST00000157761 146 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm23115-201ENSMUST00000158480 108 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm7925-201ENSMUST00000166690 401 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm27385-201ENSMUST00000184747 104 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm5842-201ENSMUST00000195073 622 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Igkv4-56-201ENSMUST00000198436 349 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm43941-201ENSMUST00000203303 1073 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm44858-201ENSMUST00000207360 154 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm31166-201ENSMUST00000209326 288 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm19921-201ENSMUST00000210505 703 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 AC153506.2-201ENSMUST00000218051 257 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 AC119241.1-201ENSMUST00000223651 534 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm5518-201ENSMUST00000084171 648 ntBASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sh3rf1Q69ZI1 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms