Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Ighv1-41-201ENSMUST00000194414 329 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Gm2077-201ENSMUST00000195017 319 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Gm43472-201ENSMUST00000200175 154 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Gm44879-201ENSMUST00000207007 503 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm2516-201ENSMUST00000210011 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 AC164117.2-201ENSMUST00000222090 327 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 AC159619.2-201ENSMUST00000222924 401 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 AC131068.1-201ENSMUST00000226891 482 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 AC160930.1-201ENSMUST00000227194 337 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
Trim28Q62318 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Trim28Q62318 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 Gm42701-201ENSMUST00000196117 1657 ntBASIC5.62□□□□□ -1.51
Trim28Q62318 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Trim28Q62318 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Trim28Q62318 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim28Q62318 AC154573.1-201ENSMUST00000225913 4659 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Mir551b-201ENSMUST00000102165 98 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm22091-201ENSMUST00000116908 127 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm23226-201ENSMUST00000116927 103 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm13614-201ENSMUST00000117306 503 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm13728-201ENSMUST00000117471 400 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim28Q62318 Gm16383-201ENSMUST00000118122 232 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm12433-201ENSMUST00000119659 255 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm22314-201ENSMUST00000158007 281 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm22156-201ENSMUST00000158409 141 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.61□□□□□ -1.51
Trim28Q62318 Mir5101-201ENSMUST00000175181 83 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm27905-201ENSMUST00000184005 207 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm21803-201ENSMUST00000188897 693 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim28Q62318 Gm38253-201ENSMUST00000194058 4678 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm38041-201ENSMUST00000194445 661 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim28Q62318 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm43096-201ENSMUST00000196173 421 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim28Q62318 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim28Q62318 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC5.61□□□□□ -1.51
Trim28Q62318 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim28Q62318 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Trim28Q62318 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim28Q62318 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Trim28Q62318 AC091260.1-201ENSMUST00000216112 229 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim28Q62318 Gm8942-201ENSMUST00000217892 400 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim28Q62318 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim28Q62318 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim28Q62318 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim28Q62318 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim28Q62318 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim28Q62318 Gm24707-201ENSMUST00000082812 107 ntBASIC5.61□□□□□ -1.51
Trim28Q62318 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim28Q62318 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim28Q62318 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim28Q62318 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim28Q62318 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim28Q62318 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim28Q62318 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim28Q62318 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim28Q62318 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim28Q62318 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim28Q62318 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Trim28Q62318 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.6□□□□□ -1.51
Trim28Q62318 Mir467g-201ENSMUST00000116906 120 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm11432-201ENSMUST00000117334 231 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm14365-201ENSMUST00000117535 587 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm14885-201ENSMUST00000117969 496 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm12571-201ENSMUST00000118132 243 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm25981-201ENSMUST00000157921 295 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm3339-201ENSMUST00000163462 475 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim28Q62318 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim28Q62318 Gm8265-201ENSMUST00000170469 475 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim28Q62318 Mir7j-201ENSMUST00000184427 122 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm5058-201ENSMUST00000187331 463 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim28Q62318 Gm29525-201ENSMUST00000189844 699 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm29523-201ENSMUST00000191415 699 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm38149-201ENSMUST00000191943 339 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Gm43649-201ENSMUST00000196596 391 ntBASIC5.6□□□□□ -1.51
Trim28Q62318 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Trim28Q62318 Gm43441-201ENSMUST00000201458 205 ntBASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms