Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.24□□□□□ -1.89
Col12a1Q60847 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Lrp1b-208ENSMUST00000167270 10071 ntTSL 5 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm336-201ENSMUST00000186376 1480 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm26247-201ENSMUST00000116702 91 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm14943-201ENSMUST00000118056 546 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm13459-201ENSMUST00000121558 646 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Mir6413-201ENSMUST00000184049 108 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm36371-201ENSMUST00000209043 1103 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 AC161520.1-201ENSMUST00000210954 939 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col12a1Q60847 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col12a1Q60847 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col12a1Q60847 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col12a1Q60847 CT010444.1-201ENSMUST00000219963 3845 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col12a1Q60847 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm15094-201ENSMUST00000118394 1131 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm15103-201ENSMUST00000119893 871 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.23□□□□□ -1.89
Col12a1Q60847 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm24819-201ENSMUST00000175094 166 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm24816-201ENSMUST00000175311 151 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Mir6401-201ENSMUST00000184499 109 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm4859-201ENSMUST00000199625 787 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Gm25134-201ENSMUST00000082646 160 ntBASIC3.23□□□□□ -1.89
Col12a1Q60847 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col12a1Q60847 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col12a1Q60847 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Mir3076-201ENSMUST00000175415 60 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Ighv8-1-201ENSMUST00000194897 291 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm42896-201ENSMUST00000201249 1113 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm8423-201ENSMUST00000211387 607 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm45240-201ENSMUST00000211437 674 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col12a1Q60847 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col12a1Q60847 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm17063-201ENSMUST00000168135 456 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col12a1Q60847 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col12a1Q60847 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm43845-201ENSMUST00000202462 1820 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm12261-201ENSMUST00000117499 645 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm13924-201ENSMUST00000119899 486 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col12a1Q60847 Olfr192-201ENSMUST00000080251 925 ntBASIC3.22□□□□□ -1.89
Col12a1Q60847 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col12a1Q60847 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.21□□□□□ -1.9
Col12a1Q60847 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col12a1Q60847 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col12a1Q60847 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col12a1Q60847 Gm16420-201ENSMUST00000120258 856 ntBASIC3.21□□□□□ -1.9
Col12a1Q60847 Gm20162-201ENSMUST00000193629 871 ntBASIC3.21□□□□□ -1.9
Col12a1Q60847 AC153544.1-201ENSMUST00000217988 400 ntBASIC3.21□□□□□ -1.9
Col12a1Q60847 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC3.21□□□□□ -1.9
Col12a1Q60847 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Col12a1Q60847 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
Col12a1Q60847 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col12a1Q60847 Gm37329-201ENSMUST00000192973 2057 ntBASIC3.21□□□□□ -1.9
Col12a1Q60847 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Col12a1Q60847 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.21□□□□□ -1.9
Col12a1Q60847 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Col12a1Q60847 Gm25529-201ENSMUST00000104850 92 ntBASIC3.21□□□□□ -1.9
Col12a1Q60847 Gm11414-201ENSMUST00000121795 263 ntBASIC3.21□□□□□ -1.9
Col12a1Q60847 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC3.21□□□□□ -1.9
Col12a1Q60847 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC3.21□□□□□ -1.9
Col12a1Q60847 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.21□□□□□ -1.9
Col12a1Q60847 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Col12a1Q60847 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
Col12a1Q60847 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Col12a1Q60847 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Col12a1Q60847 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Col12a1Q60847 Gm37964-201ENSMUST00000192459 4905 ntBASIC3.2□□□□□ -1.9
Col12a1Q60847 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Col12a1Q60847 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms