Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm23168-201ENSMUST00000157156 143 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm24244-201ENSMUST00000157317 130 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm24898-201ENSMUST00000158133 106 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm24664-201ENSMUST00000158939 100 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Mir1264-201ENSMUST00000175381 86 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm27903-201ENSMUST00000175482 126 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm18415-201ENSMUST00000177464 647 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm28010-201ENSMUST00000179485 126 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm28314-201ENSMUST00000191276 345 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm36943-201ENSMUST00000194422 282 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm9722-201ENSMUST00000194568 802 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm2189-201ENSMUST00000201419 429 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm45080-201ENSMUST00000206648 283 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Mir99a-201ENSMUST00000083596 65 ntBASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
Trav6-2Q5R1I4 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.89
Trav6-2Q5R1I4 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.28□□□□□ -1.89
Trav6-2Q5R1I4 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm37588-201ENSMUST00000195024 2496 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm12873-201ENSMUST00000119988 422 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm12897-201ENSMUST00000120341 250 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm11233-201ENSMUST00000122357 634 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm23667-201ENSMUST00000157466 120 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm26487-201ENSMUST00000158022 94 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm25898-201ENSMUST00000158303 106 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm25835-201ENSMUST00000158917 144 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm6900-201ENSMUST00000178971 342 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm28263-201ENSMUST00000185884 400 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm37097-201ENSMUST00000193676 336 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm19030-201ENSMUST00000194947 552 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm36954-201ENSMUST00000195362 363 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm2314-201ENSMUST00000200391 586 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Olfr1309-201ENSMUST00000207885 964 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 AC159819.1-201ENSMUST00000213911 328 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm46138-201ENSMUST00000215294 426 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm21007-201ENSMUST00000221024 326 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Snord15a-201ENSMUST00000083888 148 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Has2-201ENSMUST00000050544 4237 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm43658-201ENSMUST00000202348 4176 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC3.27□□□□□ -1.89
Trav6-2Q5R1I4 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Olfr1000-203ENSMUST00000216571 2028 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm22590-201ENSMUST00000104247 128 ntBASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm23322-201ENSMUST00000104464 167 ntBASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm15267-201ENSMUST00000120888 464 ntBASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm14623-201ENSMUST00000121398 603 ntBASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm15212-201ENSMUST00000122403 466 ntBASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm25047-201ENSMUST00000122667 104 ntBASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC3.26□□□□□ -1.89
Trav6-2Q5R1I4 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC3.26□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms