Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 AC164102.1-201ENSMUST00000220524 1553 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm15783-201ENSMUST00000117521 633 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm12335-201ENSMUST00000119738 327 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm12543-201ENSMUST00000120410 543 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm6565-201ENSMUST00000121217 438 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm13009-201ENSMUST00000121307 267 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm15038-201ENSMUST00000122144 296 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm25606-201ENSMUST00000158363 95 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm19791-201ENSMUST00000180398 859 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Trbv8-201ENSMUST00000194020 285 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm20177-201ENSMUST00000203705 334 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 AC164424.1-201ENSMUST00000221690 170 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Gm22423-201ENSMUST00000082861 184 ntBASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Upf3bQ3ULL6 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Olfr1234-203ENSMUST00000137692 3827 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm23540-201ENSMUST00000157543 164 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm23824-201ENSMUST00000158741 276 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm28574-201ENSMUST00000185757 699 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm28781-201ENSMUST00000185760 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm28339-201ENSMUST00000185845 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm29062-201ENSMUST00000186032 694 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm29574-201ENSMUST00000186226 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm28828-201ENSMUST00000186601 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm28057-201ENSMUST00000186603 615 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm28255-201ENSMUST00000187101 694 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm29307-201ENSMUST00000187367 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm28397-201ENSMUST00000187970 699 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm28896-201ENSMUST00000188609 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm29545-201ENSMUST00000188878 694 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm29339-201ENSMUST00000189613 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm28159-201ENSMUST00000190296 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm29366-201ENSMUST00000190481 699 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm29407-201ENSMUST00000191468 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm37433-201ENSMUST00000192695 678 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm37441-201ENSMUST00000194430 678 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm38107-201ENSMUST00000194873 696 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm17781-201ENSMUST00000195232 649 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm21006-201ENSMUST00000196930 667 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 5430434I15Rik-201ENSMUST00000197658 1257 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm7041-201ENSMUST00000201227 524 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm43440-201ENSMUST00000201957 729 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm44611-201ENSMUST00000207507 355 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm44869-201ENSMUST00000208836 357 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 AC154441.1-201ENSMUST00000223653 1006 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 AC158981.3-201ENSMUST00000226844 1024 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 AC154419.1-201ENSMUST00000227627 272 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Olfr1446-203ENSMUST00000216805 2417 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Kctd12b-201ENSMUST00000039424 4795 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.87□□□□□ -1.79
Upf3bQ3ULL6 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm25833-201ENSMUST00000104137 133 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm22310-201ENSMUST00000157509 116 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm23585-201ENSMUST00000157656 102 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm36964-201ENSMUST00000191876 198 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm4859-201ENSMUST00000199625 787 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm43090-201ENSMUST00000202459 314 ntBASIC3.86□□□□□ -1.79
Upf3bQ3ULL6 Gm7587-201ENSMUST00000207618 1021 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms