Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm43320-201ENSMUST00000196047 2916 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm13009-201ENSMUST00000121307 267 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm25332-201ENSMUST00000158038 105 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm20399-201ENSMUST00000174652 132 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm27903-201ENSMUST00000175482 126 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm20693-201ENSMUST00000177431 211 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm17777-201ENSMUST00000189740 1276 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Olfr1042-202ENSMUST00000215624 5096 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Olfr824-203ENSMUST00000215217 3619 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Upf3aQ3ULJ3 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm43834-201ENSMUST00000197097 4830 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm15180-201ENSMUST00000117745 492 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm11869-201ENSMUST00000118701 329 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm13170-201ENSMUST00000119716 643 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm13508-201ENSMUST00000121639 775 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm25860-201ENSMUST00000158252 126 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm22646-201ENSMUST00000175130 115 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm28654-201ENSMUST00000189801 379 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm36964-201ENSMUST00000191876 198 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 AC172027.1-201ENSMUST00000217659 337 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm21007-201ENSMUST00000221024 326 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Snord15a-201ENSMUST00000083888 148 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.94□□□□□ -1.78
Upf3aQ3ULJ3 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm15387-201ENSMUST00000120421 648 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Snora81-201ENSMUST00000157310 178 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Mir1946a-201ENSMUST00000158360 134 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm26141-201ENSMUST00000175299 126 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm6680-201ENSMUST00000192789 950 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm6230-201ENSMUST00000208077 780 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm5518-201ENSMUST00000084171 648 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm10161-201ENSMUST00000091506 204 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm42486-201ENSMUST00000200369 3486 ntBASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Upf3aQ3ULJ3 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms