Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm24730-201ENSMUST00000158228 117 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm23071-201ENSMUST00000158242 115 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm24359-201ENSMUST00000158418 221 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm24264-201ENSMUST00000179835 94 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm27148-201ENSMUST00000185086 160 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm36935-201ENSMUST00000192526 292 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm37784-201ENSMUST00000193233 189 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm37763-201ENSMUST00000193445 120 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Ighv1-35-201ENSMUST00000195265 351 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm44720-201ENSMUST00000206076 260 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 AC154248.1-201ENSMUST00000222072 495 ntTSL 5 BASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm10095-201ENSMUST00000222765 483 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 AC164297.3-201ENSMUST00000224238 94 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Gm24817-201ENSMUST00000093672 105 ntBASIC6.2□□□□□ -1.42
Col9a1Q05722 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col9a1Q05722 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Col9a1Q05722 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Col9a1Q05722 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col9a1Q05722 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col9a1Q05722 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm36947-201ENSMUST00000194709 2249 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Rab3c-201ENSMUST00000167824 8444 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 AC153494.1-201ENSMUST00000218664 3041 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm24160-201ENSMUST00000104594 126 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm15621-201ENSMUST00000119162 364 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm12074-201ENSMUST00000120189 219 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm25599-201ENSMUST00000157816 103 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Mir1963-201ENSMUST00000158594 59 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Mir7669-201ENSMUST00000183442 58 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Mir7074-201ENSMUST00000183884 63 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm28453-203ENSMUST00000187041 189 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm28957-201ENSMUST00000190174 373 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm37692-201ENSMUST00000192633 232 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm37511-201ENSMUST00000192901 294 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 AC153864.2-201ENSMUST00000220424 292 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 AC124739.2-201ENSMUST00000222201 109 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 CT025667.1-201ENSMUST00000225872 382 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Col9a1Q05722 AC115047.2-201ENSMUST00000214421 1848 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 AC165080.3-201ENSMUST00000217162 3116 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm45033-201ENSMUST00000206710 3167 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col9a1Q05722 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Ermap-206ENSMUST00000138395 4551 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm43834-201ENSMUST00000197097 4830 ntBASIC6.19□□□□□ -1.42
Col9a1Q05722 Gm43769-201ENSMUST00000201871 4323 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Col9a1Q05722 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col9a1Q05722 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.18□□□□□ -1.42
Col9a1Q05722 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col9a1Q05722 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.18□□□□□ -1.42
Col9a1Q05722 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Olfr239-203ENSMUST00000214406 3773 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col9a1Q05722 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Col9a1Q05722 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm11970-201ENSMUST00000116105 320 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm23879-201ENSMUST00000116874 126 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm14657-201ENSMUST00000117461 302 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm14119-201ENSMUST00000119511 235 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm23233-201ENSMUST00000157301 137 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm25439-201ENSMUST00000158280 131 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm22113-201ENSMUST00000158343 104 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm3370-201ENSMUST00000171785 500 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm20257-202ENSMUST00000188643 130 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm44881-201ENSMUST00000205425 367 ntBASIC6.18□□□□□ -1.42
Col9a1Q05722 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 126.7 ms