Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 Mir101b-201ENSMUST00000083622 97 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx3-1P97436 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm44527-202ENSMUST00000204519 1314 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Mir147-201ENSMUST00000102354 79 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm24376-201ENSMUST00000104399 127 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm11869-201ENSMUST00000118701 329 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm11623-201ENSMUST00000120176 1225 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm12543-201ENSMUST00000120410 543 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm25860-201ENSMUST00000158252 126 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm3030-201ENSMUST00000163410 516 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm28654-201ENSMUST00000189801 379 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm18900-201ENSMUST00000193218 584 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm18843-201ENSMUST00000194982 719 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm44773-201ENSMUST00000207374 557 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm18672-201ENSMUST00000208035 270 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm45735-201ENSMUST00000212779 319 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 AL772397.1-201ENSMUST00000216707 606 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Snora31-201ENSMUST00000083213 130 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm10161-201ENSMUST00000091506 204 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.16□□□□□ -1.9
Nkx3-1P97436 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.16□□□□□ -1.9
Nkx3-1P97436 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Nkx3-1P97436 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Nkx3-1P97436 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.15□□□□□ -1.9
Nkx3-1P97436 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Vmn1r-ps126-201ENSMUST00000117681 926 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm11408-201ENSMUST00000117889 519 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm8244-201ENSMUST00000121254 264 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm12204-201ENSMUST00000147412 333 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm25535-201ENSMUST00000175364 125 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Mir7578-201ENSMUST00000183455 82 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm8282-201ENSMUST00000187559 483 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm36994-201ENSMUST00000192941 492 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm43476-201ENSMUST00000197873 405 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm44118-201ENSMUST00000204665 229 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm44703-201ENSMUST00000205724 248 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm45327-201ENSMUST00000211612 565 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm19181-201ENSMUST00000218891 940 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Tas2r109-201ENSMUST00000067539 951 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Snord15a-201ENSMUST00000083888 148 ntBASIC3.15□□□□□ -1.91
Nkx3-1P97436 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Nkx3-1P97436 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Nkx3-1P97436 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.14□□□□□ -1.91
Nkx3-1P97436 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Nkx3-1P97436 Gm2042-207ENSMUST00000181326 2440 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
Nkx3-1P97436 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Nkx3-1P97436 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC3.14□□□□□ -1.91
Nkx3-1P97436 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC3.14□□□□□ -1.91
Nkx3-1P97436 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Nkx3-1P97436 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms