Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shox2P70390 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Shox2P70390 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC3.57□□□□□ -1.84
Shox2P70390 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Shox2P70390 Gm13733-201ENSMUST00000117290 535 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Shox2P70390 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Shox2P70390 Gm27315-201ENSMUST00000183977 154 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm18486-201ENSMUST00000184040 298 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Mir6398-201ENSMUST00000184541 102 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm6802-202ENSMUST00000186566 126 ntBASIC3.57□□□□□ -1.84
Shox2P70390 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm37965-201ENSMUST00000195304 1362 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
Shox2P70390 Gm43604-201ENSMUST00000199799 705 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm43424-201ENSMUST00000200484 253 ntBASIC3.57□□□□□ -1.84
Shox2P70390 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Shox2P70390 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.57□□□□□ -1.84
Shox2P70390 Gm45312-201ENSMUST00000210566 311 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm3690-201ENSMUST00000211341 262 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC3.57□□□□□ -1.84
Shox2P70390 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Shox2P70390 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Shox2P70390 Gm18388-201ENSMUST00000222339 557 ntBASIC3.57□□□□□ -1.84
Shox2P70390 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Vmn1r179-201ENSMUST00000049819 972 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shox2P70390 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shox2P70390 Olfr986-201ENSMUST00000062229 1016 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shox2P70390 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Shox2P70390 Snord22-201ENSMUST00000083153 126 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Gm10212-201ENSMUST00000087884 324 ntBASIC3.57□□□□□ -1.84
Shox2P70390 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
Shox2P70390 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Shox2P70390 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Shox2P70390 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
Shox2P70390 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Shox2P70390 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Shox2P70390 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shox2P70390 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
Shox2P70390 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shox2P70390 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.56□□□□□ -1.84
Shox2P70390 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Shox2P70390 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Shox2P70390 AC153801.2-201ENSMUST00000219875 3372 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Shox2P70390 AC154184.1-201ENSMUST00000224375 1620 ntBASIC3.56□□□□□ -1.84
Shox2P70390 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Shox2P70390 AC149294.7-201ENSMUST00000227475 1432 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm12667-201ENSMUST00000118299 1332 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Shox2P70390 Gm23481-201ENSMUST00000104173 131 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm23175-201ENSMUST00000104371 132 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm12515-201ENSMUST00000120116 361 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm11387-201ENSMUST00000120266 772 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm13092-201ENSMUST00000136346 260 ntBASIC3.56□□□□□ -1.84
Shox2P70390 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.56□□□□□ -1.84
Shox2P70390 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.56□□□□□ -1.84
Shox2P70390 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC3.56□□□□□ -1.84
Shox2P70390 Gm23441-201ENSMUST00000157268 127 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm26005-201ENSMUST00000158802 134 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.56□□□□□ -1.84
Shox2P70390 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC3.56□□□□□ -1.84
Shox2P70390 Gm20542-201ENSMUST00000174582 372 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm29320-201ENSMUST00000185235 615 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm29179-202ENSMUST00000186138 615 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm29448-201ENSMUST00000186675 615 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm29314-201ENSMUST00000186800 615 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm28253-202ENSMUST00000187971 615 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm29169-201ENSMUST00000189835 615 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm7443-201ENSMUST00000206355 378 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Gm45162-201ENSMUST00000209013 618 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Fth-ps3-201ENSMUST00000210405 358 ntBASIC3.56□□□□□ -1.84
Shox2P70390 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Shox2P70390 AC167013.2-202ENSMUST00000227035 333 ntBASIC3.56□□□□□ -1.84
Shox2P70390 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Shox2P70390 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
Shox2P70390 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
Shox2P70390 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.56□□□□□ -1.84
Shox2P70390 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Shox2P70390 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Shox2P70390 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
Shox2P70390 Gm13058-201ENSMUST00000117097 1435 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Gm25420-201ENSMUST00000104216 127 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Amd-ps1-201ENSMUST00000120127 994 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Gm13508-201ENSMUST00000121639 775 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Gm15038-201ENSMUST00000122144 296 ntBASIC3.55□□□□□ -1.84
Shox2P70390 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Gm7855-201ENSMUST00000137737 687 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.55□□□□□ -1.84
Shox2P70390 Gm24244-201ENSMUST00000157317 130 ntBASIC3.55□□□□□ -1.84
Shox2P70390 Gm16558-201ENSMUST00000163015 532 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms