Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC4.34□□□□□ -1.71
NcanP55066 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC4.34□□□□□ -1.71
NcanP55066 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NcanP55066 AC117797.2-201ENSMUST00000224419 531 ntBASIC4.34□□□□□ -1.71
NcanP55066 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.34□□□□□ -1.71
NcanP55066 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NcanP55066 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.34□□□□□ -1.71
NcanP55066 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NcanP55066 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC4.34□□□□□ -1.71
NcanP55066 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NcanP55066 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
NcanP55066 Gm12586-201ENSMUST00000117328 1316 ntBASIC4.34□□□□□ -1.71
NcanP55066 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NcanP55066 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.34□□□□□ -1.71
NcanP55066 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
NcanP55066 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
NcanP55066 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
NcanP55066 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.34□□□□□ -1.72
NcanP55066 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
NcanP55066 Olfr124-202ENSMUST00000215168 4497 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
NcanP55066 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
NcanP55066 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.33□□□□□ -1.72
NcanP55066 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NcanP55066 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NcanP55066 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
NcanP55066 Gm650-201ENSMUST00000144428 1551 ntBASIC4.33□□□□□ -1.72
NcanP55066 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.33□□□□□ -1.72
NcanP55066 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
NcanP55066 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
NcanP55066 Gm44562-201ENSMUST00000207194 1347 ntBASIC4.33□□□□□ -1.72
NcanP55066 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NcanP55066 Gm25539-201ENSMUST00000116886 122 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm12261-201ENSMUST00000117499 645 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm12788-201ENSMUST00000119090 308 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm7618-201ENSMUST00000121643 171 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm15141-201ENSMUST00000121860 729 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm26254-201ENSMUST00000122491 118 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm25290-201ENSMUST00000122796 144 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.33□□□□□ -1.72
NcanP55066 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.33□□□□□ -1.72
NcanP55066 Gm22519-201ENSMUST00000158270 178 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm25898-201ENSMUST00000158303 106 ntBASIC4.33□□□□□ -1.72
NcanP55066 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NcanP55066 Gm17075-201ENSMUST00000171924 670 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm38214-201ENSMUST00000192581 988 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm37001-201ENSMUST00000193377 190 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm37993-201ENSMUST00000195301 988 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm32975-201ENSMUST00000211651 584 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NcanP55066 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC4.33□□□□□ -1.72
NcanP55066 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
NcanP55066 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NcanP55066 Gm19540-201ENSMUST00000221843 810 ntBASIC4.33□□□□□ -1.72
NcanP55066 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NcanP55066 AC167013.2-202ENSMUST00000227035 333 ntBASIC4.33□□□□□ -1.72
NcanP55066 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NcanP55066 Gm25800-201ENSMUST00000082636 134 ntBASIC4.33□□□□□ -1.72
NcanP55066 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
NcanP55066 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
NcanP55066 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
NcanP55066 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.33□□□□□ -1.72
NcanP55066 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
NcanP55066 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NcanP55066 AC154323.3-201ENSMUST00000226927 1660 ntBASIC4.32□□□□□ -1.72
NcanP55066 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NcanP55066 Gm36529-201ENSMUST00000222495 1529 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NcanP55066 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NcanP55066 Gm23060-201ENSMUST00000102345 109 ntBASIC4.32□□□□□ -1.72
NcanP55066 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NcanP55066 Gm11746-201ENSMUST00000119843 821 ntBASIC4.32□□□□□ -1.72
NcanP55066 Gm12587-201ENSMUST00000120180 427 ntBASIC4.32□□□□□ -1.72
NcanP55066 Gm25436-201ENSMUST00000158275 145 ntBASIC4.32□□□□□ -1.72
NcanP55066 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NcanP55066 Gm26983-201ENSMUST00000182051 388 ntBASIC4.32□□□□□ -1.72
NcanP55066 Gm27715-201ENSMUST00000184714 260 ntBASIC4.32□□□□□ -1.72
NcanP55066 Gm27457-201ENSMUST00000184771 156 ntBASIC4.32□□□□□ -1.72
NcanP55066 Gm38280-201ENSMUST00000192610 158 ntBASIC4.32□□□□□ -1.72
NcanP55066 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.32□□□□□ -1.72
NcanP55066 Gm37617-201ENSMUST00000194309 159 ntBASIC4.32□□□□□ -1.72
NcanP55066 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.32□□□□□ -1.72
NcanP55066 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.32□□□□□ -1.72
NcanP55066 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.32□□□□□ -1.72
NcanP55066 Gm40394-201ENSMUST00000221321 633 ntTSL 5 BASIC4.32□□□□□ -1.72
NcanP55066 Gm3829-201ENSMUST00000222362 619 ntBASIC4.32□□□□□ -1.72
NcanP55066 AC125223.1-203ENSMUST00000225304 498 ntBASIC4.32□□□□□ -1.72
NcanP55066 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.32□□□□□ -1.72
NcanP55066 AC107453.2-201ENSMUST00000227714 655 ntBASIC4.32□□□□□ -1.72
NcanP55066 AC133654.1-201ENSMUST00000228411 672 ntBASIC4.32□□□□□ -1.72
NcanP55066 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NcanP55066 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NcanP55066 Gm37777-201ENSMUST00000195546 3366 ntBASIC4.32□□□□□ -1.72
NcanP55066 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NcanP55066 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NcanP55066 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NcanP55066 Olfr388-ps1-201ENSMUST00000118336 2129 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NcanP55066 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
NcanP55066 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.31□□□□□ -1.72
NcanP55066 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 100.9 ms