Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HttP42859 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HttP42859 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.52□□□□□ -1.85
HttP42859 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.52□□□□□ -1.85
HttP42859 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.52□□□□□ -1.85
HttP42859 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.52□□□□□ -1.85
HttP42859 Ighv1-68-201ENSMUST00000198789 294 ntBASIC3.52□□□□□ -1.85
HttP42859 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HttP42859 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
HttP42859 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HttP42859 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HttP42859 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.52□□□□□ -1.85
HttP42859 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
HttP42859 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HttP42859 Gm14714-201ENSMUST00000119743 439 ntBASIC3.51□□□□□ -1.85
HttP42859 Gm24816-201ENSMUST00000175311 151 ntBASIC3.51□□□□□ -1.85
HttP42859 Mir6398-201ENSMUST00000184541 102 ntBASIC3.51□□□□□ -1.85
HttP42859 Gm28064-201ENSMUST00000185639 858 ntBASIC3.51□□□□□ -1.85
HttP42859 Gm37946-201ENSMUST00000192064 347 ntBASIC3.51□□□□□ -1.85
HttP42859 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.51□□□□□ -1.85
HttP42859 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HttP42859 Gm43668-201ENSMUST00000197014 5342 ntBASIC3.51□□□□□ -1.85
HttP42859 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HttP42859 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HttP42859 Gm25377-201ENSMUST00000104334 129 ntBASIC3.51□□□□□ -1.85
HttP42859 Gm16420-201ENSMUST00000120258 856 ntBASIC3.51□□□□□ -1.85
HttP42859 Gm23048-201ENSMUST00000157237 129 ntBASIC3.51□□□□□ -1.85
HttP42859 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC3.51□□□□□ -1.85
HttP42859 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
HttP42859 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HttP42859 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.51□□□□□ -1.85
HttP42859 Olfr143-201ENSMUST00000093865 942 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
HttP42859 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HttP42859 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
HttP42859 Olfr190-203ENSMUST00000216495 8240 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
HttP42859 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
HttP42859 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
HttP42859 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HttP42859 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.5□□□□□ -1.85
HttP42859 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.5□□□□□ -1.85
HttP42859 Olfr1280-203ENSMUST00000219291 6883 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
HttP42859 Eda2r-201ENSMUST00000037353 4752 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HttP42859 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HttP42859 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HttP42859 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HttP42859 Gm43736-201ENSMUST00000196377 2281 ntBASIC3.5□□□□□ -1.85
HttP42859 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC3.5□□□□□ -1.85
HttP42859 Gm14810-201ENSMUST00000121628 486 ntBASIC3.5□□□□□ -1.85
HttP42859 Gm17967-201ENSMUST00000195319 647 ntBASIC3.5□□□□□ -1.85
HttP42859 Gm19620-201ENSMUST00000195972 434 ntBASIC3.5□□□□□ -1.85
HttP42859 Mir378a-201ENSMUST00000198300 66 ntBASIC3.5□□□□□ -1.85
HttP42859 Gm45733-201ENSMUST00000212988 437 ntBASIC3.5□□□□□ -1.85
HttP42859 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC3.5□□□□□ -1.85
HttP42859 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.5□□□□□ -1.85
HttP42859 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HttP42859 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
HttP42859 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HttP42859 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HttP42859 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HttP42859 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC3.5□□□□□ -1.85
HttP42859 Gm42455-201ENSMUST00000199761 2736 ntBASIC3.5□□□□□ -1.85
HttP42859 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
HttP42859 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HttP42859 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.5□□□□□ -1.85
HttP42859 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC3.5□□□□□ -1.85
HttP42859 AC167669.3-201ENSMUST00000224720 393 ntBASIC3.5□□□□□ -1.85
HttP42859 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HttP42859 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HttP42859 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
HttP42859 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HttP42859 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HttP42859 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HttP42859 Gm37964-201ENSMUST00000192459 4905 ntBASIC3.49□□□□□ -1.85
HttP42859 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HttP42859 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HttP42859 V1rd19-201ENSMUST00000173571 1157 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HttP42859 Gm44844-201ENSMUST00000207242 336 ntBASIC3.49□□□□□ -1.85
HttP42859 AC158631.2-201ENSMUST00000219999 478 ntBASIC3.49□□□□□ -1.85
HttP42859 AC168062.3-201ENSMUST00000227025 165 ntBASIC3.49□□□□□ -1.85
HttP42859 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HttP42859 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HttP42859 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HttP42859 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HttP42859 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.49□□□□□ -1.85
HttP42859 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HttP42859 Gm14987-201ENSMUST00000117820 676 ntBASIC3.49□□□□□ -1.85
HttP42859 Gm22651-201ENSMUST00000157872 94 ntBASIC3.49□□□□□ -1.85
HttP42859 Gm22968-201ENSMUST00000157955 118 ntBASIC3.49□□□□□ -1.85
HttP42859 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC3.49□□□□□ -1.85
HttP42859 AC168266.1-201ENSMUST00000216024 226 ntBASIC3.49□□□□□ -1.85
HttP42859 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HttP42859 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HttP42859 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.49□□□□□ -1.85
HttP42859 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HttP42859 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HttP42859 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
HttP42859 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
HttP42859 Gm43259-201ENSMUST00000198446 3277 ntBASIC3.48□□□□□ -1.85
HttP42859 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HttP42859 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 105.9 ms