Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm8296-201ENSMUST00000185597 524 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC4.73□□□□□ -1.65
Traf1P39428 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Gm43491-201ENSMUST00000197133 784 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Gm42526-201ENSMUST00000198956 393 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Gm43730-201ENSMUST00000199863 372 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Gm8035-201ENSMUST00000204625 687 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Gm8132-201ENSMUST00000204938 640 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC4.73□□□□□ -1.65
Traf1P39428 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC4.73□□□□□ -1.65
Traf1P39428 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Traf1P39428 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Traf1P39428 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC4.73□□□□□ -1.65
Traf1P39428 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Traf1P39428 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Gm18180-201ENSMUST00000187562 1484 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.73□□□□□ -1.65
Traf1P39428 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.73□□□□□ -1.65
Traf1P39428 Atad1-201ENSMUST00000070210 2813 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Traf1P39428 3110062G12Rik-201ENSMUST00000192113 1419 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm45131-201ENSMUST00000208051 2582 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Traf1P39428 AC132336.1-201ENSMUST00000222844 1740 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Traf1P39428 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Traf1P39428 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Traf1P39428 Gm25097-201ENSMUST00000104042 145 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC4.72□□□□□ -1.65
Traf1P39428 Gm12427-201ENSMUST00000117719 302 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm15313-201ENSMUST00000119179 282 ntBASIC4.72□□□□□ -1.65
Traf1P39428 n-R5s45-201ENSMUST00000122592 110 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Traf1P39428 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC4.72□□□□□ -1.65
Traf1P39428 Gm24905-201ENSMUST00000158129 104 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Scgb2b5-ps-201ENSMUST00000190227 270 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm28396-201ENSMUST00000190309 379 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm37416-201ENSMUST00000193596 318 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm18984-201ENSMUST00000193998 1124 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm18340-201ENSMUST00000196342 609 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Mir1892-201ENSMUST00000197752 80 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm4859-201ENSMUST00000199625 787 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Gm45539-201ENSMUST00000210313 428 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Traf1P39428 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Traf1P39428 Gm23102-201ENSMUST00000083724 116 ntBASIC4.72□□□□□ -1.65
Traf1P39428 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.72□□□□□ -1.65
Traf1P39428 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Traf1P39428 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Traf1P39428 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Traf1P39428 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Traf1P39428 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Traf1P39428 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Traf1P39428 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Traf1P39428 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Traf1P39428 Gm14299-201ENSMUST00000117586 397 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm13314-201ENSMUST00000118742 335 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm14554-201ENSMUST00000119548 661 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm7219-201ENSMUST00000119619 297 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm11575-201ENSMUST00000122243 228 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Traf1P39428 Gm9587-201ENSMUST00000172449 454 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.71□□□□□ -1.66
Traf1P39428 Gm25999-201ENSMUST00000175398 133 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Mir6393-201ENSMUST00000183709 94 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.71□□□□□ -1.66
Traf1P39428 Gm19214-201ENSMUST00000191956 1083 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm29747-201ENSMUST00000194764 585 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm42474-201ENSMUST00000201073 505 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.71□□□□□ -1.66
Traf1P39428 AC153932.1-201ENSMUST00000218558 787 ntBASIC4.71□□□□□ -1.66
Traf1P39428 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC4.71□□□□□ -1.66
Traf1P39428 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Traf1P39428 Gm5655-201ENSMUST00000221078 901 ntBASIC4.71□□□□□ -1.66
Traf1P39428 AC133517.1-202ENSMUST00000224409 233 ntBASIC4.71□□□□□ -1.66
Traf1P39428 AC166095.1-203ENSMUST00000224591 233 ntBASIC4.71□□□□□ -1.66
Traf1P39428 AC183096.1-201ENSMUST00000226392 130 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Traf1P39428 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
Traf1P39428 Mir28a-201ENSMUST00000083560 86 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Gm22829-201ENSMUST00000083771 106 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Traf1P39428 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Traf1P39428 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Traf1P39428 Gm44434-201ENSMUST00000203918 3745 ntBASIC4.71□□□□□ -1.66
Traf1P39428 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.71□□□□□ -1.66
Traf1P39428 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Traf1P39428 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Traf1P39428 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Traf1P39428 Gm45176-201ENSMUST00000207696 4096 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Gm6215-201ENSMUST00000119297 1386 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Gm11432-201ENSMUST00000117334 231 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Gm24898-201ENSMUST00000158133 106 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Traf1P39428 Gm17194-201ENSMUST00000164610 348 ntBASIC4.7□□□□□ -1.66
Traf1P39428 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms