Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm22343-201ENSMUST00000122648 286 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC4.82□□□□□ -1.64
LdlrP35951 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.82□□□□□ -1.64
LdlrP35951 Gm22383-201ENSMUST00000158188 327 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm25605-201ENSMUST00000158364 124 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm23024-201ENSMUST00000158770 292 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LdlrP35951 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LdlrP35951 Gm23568-201ENSMUST00000177960 92 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm24829-201ENSMUST00000179245 92 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Gm27636-201ENSMUST00000184528 122 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm9687-201ENSMUST00000189312 602 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm43856-201ENSMUST00000197004 369 ntBASIC4.82□□□□□ -1.64
LdlrP35951 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.82□□□□□ -1.64
LdlrP35951 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LdlrP35951 Gm45157-201ENSMUST00000208729 401 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm45409-201ENSMUST00000211486 252 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm18924-201ENSMUST00000211929 316 ntBASIC4.82□□□□□ -1.64
LdlrP35951 AC101677.1-201ENSMUST00000218590 158 ntBASIC4.82□□□□□ -1.64
LdlrP35951 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.82□□□□□ -1.64
LdlrP35951 AC154552.4-201ENSMUST00000222171 151 ntBASIC4.82□□□□□ -1.64
LdlrP35951 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.82□□□□□ -1.64
LdlrP35951 AC138765.1-201ENSMUST00000228657 385 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Olfr918-201ENSMUST00000055099 978 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
LdlrP35951 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Gm8724-201ENSMUST00000081668 483 ntBASIC4.82□□□□□ -1.64
LdlrP35951 n-R5s167-201ENSMUST00000083227 121 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm22826-201ENSMUST00000083774 165 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm25512-201ENSMUST00000083863 107 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Gm26107-201ENSMUST00000083972 107 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LdlrP35951 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LdlrP35951 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Vmn1r84-205ENSMUST00000228653 2769 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
LdlrP35951 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LdlrP35951 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LdlrP35951 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LdlrP35951 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
LdlrP35951 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
LdlrP35951 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
LdlrP35951 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LdlrP35951 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC4.82□□□□□ -1.64
LdlrP35951 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
LdlrP35951 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
LdlrP35951 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm13582-201ENSMUST00000146034 2655 ntTSL 2 BASIC4.81□□□□□ -1.64
LdlrP35951 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Gm15128-202ENSMUST00000178833 1350 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm37115-201ENSMUST00000193750 2849 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm24170-201ENSMUST00000104124 133 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm24469-201ENSMUST00000104487 131 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm11322-201ENSMUST00000118095 435 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm14918-201ENSMUST00000118153 268 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm12186-201ENSMUST00000119050 945 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm5287-201ENSMUST00000120666 598 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Gm24931-201ENSMUST00000158324 107 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm25048-201ENSMUST00000158598 91 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm22668-201ENSMUST00000158716 260 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm16566-201ENSMUST00000160387 910 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm2343-201ENSMUST00000161177 1042 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC4.81□□□□□ -1.64
LdlrP35951 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.81□□□□□ -1.64
LdlrP35951 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Gm8403-201ENSMUST00000189712 1298 ntBASIC4.81□□□□□ -1.64
LdlrP35951 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
LdlrP35951 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
LdlrP35951 Gm43315-201ENSMUST00000198120 313 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Igkv13-56-1-201ENSMUST00000198481 209 ntBASIC4.81□□□□□ -1.64
LdlrP35951 Gm42594-201ENSMUST00000199511 246 ntBASIC4.81□□□□□ -1.64
LdlrP35951 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC4.81□□□□□ -1.64
LdlrP35951 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC4.81□□□□□ -1.64
LdlrP35951 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC4.81□□□□□ -1.64
LdlrP35951 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms