Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Pde6bP23440 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Pde6bP23440 Gm43718-201ENSMUST00000197524 1857 ntBASIC5.88□□□□□ -1.47
Pde6bP23440 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Pde6bP23440 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 AW046200-203ENSMUST00000211787 2479 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Pde6bP23440 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Pde6bP23440 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm24683-201ENSMUST00000104840 88 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm11550-201ENSMUST00000118210 699 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm15025-201ENSMUST00000118434 418 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.87□□□□□ -1.47
Pde6bP23440 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.87□□□□□ -1.47
Pde6bP23440 Gm2020-201ENSMUST00000145242 579 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm22842-201ENSMUST00000157709 118 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm25706-201ENSMUST00000157828 247 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm17086-201ENSMUST00000171346 484 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm26731-201ENSMUST00000180683 543 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 Gm18505-201ENSMUST00000187360 790 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.87□□□□□ -1.47
Pde6bP23440 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Gm29524-201ENSMUST00000190819 699 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
Pde6bP23440 Mir466e-201ENSMUST00000198862 84 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm5284-201ENSMUST00000199053 903 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm45048-201ENSMUST00000207058 429 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm44655-201ENSMUST00000207768 423 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm18487-201ENSMUST00000215826 878 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Pde6bP23440 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pde6bP23440 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.87□□□□□ -1.47
Pde6bP23440 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pde6bP23440 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pde6bP23440 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pde6bP23440 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pde6bP23440 Gm37268-201ENSMUST00000192254 2614 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pde6bP23440 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Pde6bP23440 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.86□□□□□ -1.47
Pde6bP23440 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Pde6bP23440 Gm25565-201ENSMUST00000104605 105 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm14163-201ENSMUST00000117342 217 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm16089-201ENSMUST00000117679 336 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm14655-201ENSMUST00000120124 578 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm15075-201ENSMUST00000122187 477 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.86□□□□□ -1.47
Pde6bP23440 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.86□□□□□ -1.47
Pde6bP23440 Scarna13-201ENSMUST00000158164 275 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm15900-201ENSMUST00000161584 342 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Pde6bP23440 Gm10784-201ENSMUST00000178715 238 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm24415-201ENSMUST00000180218 107 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Mir6400-201ENSMUST00000184870 92 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm28390-201ENSMUST00000185212 700 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.86□□□□□ -1.47
Pde6bP23440 Gm29489-201ENSMUST00000188934 324 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm36891-201ENSMUST00000191995 655 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5.86□□□□□ -1.47
Pde6bP23440 Gm33973-201ENSMUST00000195148 534 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm38008-201ENSMUST00000195333 518 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm42776-201ENSMUST00000198031 406 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm43144-201ENSMUST00000198256 485 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Gm45215-201ENSMUST00000206407 395 ntBASIC5.86□□□□□ -1.47
Pde6bP23440 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pde6bP23440 Gm34719-201ENSMUST00000222231 382 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms