Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm22764-201ENSMUST00000158370 92 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm8358-201ENSMUST00000167222 555 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm4207-201ENSMUST00000173144 960 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm22693-201ENSMUST00000175049 442 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm38393-201ENSMUST00000179360 1199 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm27308-201ENSMUST00000184807 233 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Sdc1P18828 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm28997-201ENSMUST00000188759 429 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm29334-201ENSMUST00000190334 357 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm18382-201ENSMUST00000194394 582 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm43155-201ENSMUST00000202661 494 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC3.17□□□□□ -1.9
Sdc1P18828 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm45727-201ENSMUST00000212886 572 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm34005-201ENSMUST00000215834 282 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 AC125531.1-201ENSMUST00000219849 221 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 AC096628.1-201ENSMUST00000226060 641 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm9818-201ENSMUST00000050900 255 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Sdc1P18828 Olfr818-201ENSMUST00000074308 957 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm22005-201ENSMUST00000082795 141 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Olfr992-201ENSMUST00000099927 930 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sdc1P18828 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Sdc1P18828 Gm5653-201ENSMUST00000223393 1337 ntBASIC3.17□□□□□ -1.9
Sdc1P18828 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sdc1P18828 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sdc1P18828 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm24096-201ENSMUST00000103905 110 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Gm6584-201ENSMUST00000119671 447 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm23537-201ENSMUST00000157536 330 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Gm23905-201ENSMUST00000157568 109 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Gm25383-201ENSMUST00000157810 144 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 Vmn1r10-201ENSMUST00000176073 936 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm5974-201ENSMUST00000181607 986 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm38221-201ENSMUST00000195146 365 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Gm44952-201ENSMUST00000204443 433 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 AC160016.1-201ENSMUST00000215589 448 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 AC153526.4-201ENSMUST00000217713 379 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Gm6841-201ENSMUST00000220602 598 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 AC130547.1-201ENSMUST00000228079 1047 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sdc1P18828 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Sdc1P18828 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 Olfr112-201ENSMUST00000085548 3103 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 AC112142.1-203ENSMUST00000228670 2472 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC3.16□□□□□ -1.9
Sdc1P18828 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sdc1P18828 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.16□□□□□ -1.9
Sdc1P18828 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.15□□□□□ -1.9
Sdc1P18828 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.15□□□□□ -1.9
Sdc1P18828 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
Sdc1P18828 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sdc1P18828 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm22370-201ENSMUST00000102422 83 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sdc1P18828 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
Sdc1P18828 Gm14365-201ENSMUST00000117535 587 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm13537-201ENSMUST00000120467 267 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm13489-201ENSMUST00000121234 971 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm16458-201ENSMUST00000121428 502 ntBASIC3.15□□□□□ -1.91
Sdc1P18828 Gm14916-201ENSMUST00000121904 204 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 105.2 ms