Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.83□□□□□ -1.48
Msx1P13297 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Mir342-201ENSMUST00000083502 99 ntBASIC5.83□□□□□ -1.48
Msx1P13297 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Abi1-205ENSMUST00000123948 3067 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
Msx1P13297 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Msx1P13297 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Msx1P13297 Gm43663-201ENSMUST00000198643 1505 ntBASIC5.83□□□□□ -1.48
Msx1P13297 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Msx1P13297 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Msx1P13297 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Msx1P13297 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Msx1P13297 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Zbbx-203ENSMUST00000107776 1978 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Msx1P13297 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Msx1P13297 Lrrc31-201ENSMUST00000108263 3284 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Msx1P13297 n-R5s67-201ENSMUST00000104336 114 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Gm2066-201ENSMUST00000118046 389 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm11935-201ENSMUST00000118608 399 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm15223-201ENSMUST00000120989 826 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm13417-201ENSMUST00000155475 533 ntTSL 2 BASIC5.82□□□□□ -1.48
Msx1P13297 Gm26350-201ENSMUST00000157531 288 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Zakit-201ENSMUST00000157677 308 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm24735-201ENSMUST00000158859 118 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Gm26585-201ENSMUST00000180890 630 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.82□□□□□ -1.48
Msx1P13297 Gm7837-201ENSMUST00000190873 412 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm42886-201ENSMUST00000199214 466 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm42814-201ENSMUST00000199370 460 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm44984-201ENSMUST00000207802 394 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm7802-201ENSMUST00000216464 262 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm46993-201ENSMUST00000220708 259 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm9292-201ENSMUST00000222008 710 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC5.82□□□□□ -1.48
Msx1P13297 AC091783.4-201ENSMUST00000224940 611 ntBASIC5.82□□□□□ -1.48
Msx1P13297 AC165138.1-201ENSMUST00000226984 270 ntBASIC5.82□□□□□ -1.48
Msx1P13297 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Msx1P13297 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Msx1P13297 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Msx1P13297 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.82□□□□□ -1.48
Msx1P13297 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Msx1P13297 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Msx1P13297 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Msx1P13297 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Msx1P13297 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Msx1P13297 Osbpl9-213ENSMUST00000160271 2604 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 AC133079.1-201ENSMUST00000220943 1881 ntBASIC5.81□□□□□ -1.48
Msx1P13297 CT009510.2-203ENSMUST00000226704 2136 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Eif2s3x-201ENSMUST00000050328 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Msx1P13297 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Msx1P13297 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Gm20486-201ENSMUST00000101544 128 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Msx1P13297 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Gm15783-201ENSMUST00000117521 633 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm13396-201ENSMUST00000120617 271 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm14841-201ENSMUST00000121067 758 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm11761-201ENSMUST00000121392 445 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.81□□□□□ -1.48
Msx1P13297 Gm25555-201ENSMUST00000158078 111 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm23408-201ENSMUST00000158523 265 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm25360-201ENSMUST00000178786 191 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Msx1P13297 Gm25235-201ENSMUST00000179933 107 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Msx1P13297 Gm7626-201ENSMUST00000195801 353 ntBASIC5.81□□□□□ -1.48
Msx1P13297 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms