Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm18199-201ENSMUST00000173820 835 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm22122-201ENSMUST00000175147 200 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm24407-201ENSMUST00000177864 141 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm23191-201ENSMUST00000179147 107 ntBASIC5.79□□□□□ -1.48
RaraP11416 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm27028-201ENSMUST00000182303 399 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm27210-201ENSMUST00000184263 402 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC5.79□□□□□ -1.48
RaraP11416 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC5.79□□□□□ -1.48
RaraP11416 Gm37757-201ENSMUST00000193072 210 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm44274-201ENSMUST00000203417 256 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm44074-201ENSMUST00000204562 337 ntBASIC5.79□□□□□ -1.48
RaraP11416 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm44858-201ENSMUST00000207360 154 ntBASIC5.79□□□□□ -1.48
RaraP11416 AC159297.1-201ENSMUST00000218689 290 ntBASIC5.79□□□□□ -1.48
RaraP11416 AC164567.2-201ENSMUST00000219363 445 ntBASIC5.79□□□□□ -1.48
RaraP11416 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.79□□□□□ -1.48
RaraP11416 CT485612.2-201ENSMUST00000223014 151 ntBASIC5.79□□□□□ -1.48
RaraP11416 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.79□□□□□ -1.48
RaraP11416 Snord59a-201ENSMUST00000082844 74 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm42729-201ENSMUST00000201770 2930 ntBASIC5.79□□□□□ -1.48
RaraP11416 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RaraP11416 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RaraP11416 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RaraP11416 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.79□□□□□ -1.48
RaraP11416 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.79□□□□□ -1.48
RaraP11416 AC125532.1-201ENSMUST00000216210 2334 ntBASIC5.79□□□□□ -1.48
RaraP11416 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
RaraP11416 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Olfr1537-202ENSMUST00000213472 4114 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
RaraP11416 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RaraP11416 Gm26078-201ENSMUST00000104067 128 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
RaraP11416 Gm12235-201ENSMUST00000118596 170 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm14669-201ENSMUST00000118841 250 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm15168-201ENSMUST00000121057 316 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm14804-201ENSMUST00000122322 508 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Gm24499-201ENSMUST00000158446 104 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm27460-201ENSMUST00000184213 100 ntBASIC5.78□□□□□ -1.48
RaraP11416 Mir7653-201ENSMUST00000184358 61 ntBASIC5.78□□□□□ -1.48
RaraP11416 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Gm29196-201ENSMUST00000189239 618 ntBASIC5.78□□□□□ -1.48
RaraP11416 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RaraP11416 Gm42639-201ENSMUST00000197061 1871 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm19202-201ENSMUST00000198096 808 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Gm43501-201ENSMUST00000202513 107 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm18258-201ENSMUST00000210413 542 ntBASIC5.78□□□□□ -1.48
RaraP11416 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RaraP11416 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 CT571268.1-201ENSMUST00000222320 407 ntBASIC5.78□□□□□ -1.48
RaraP11416 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.78□□□□□ -1.48
RaraP11416 AC126275.2-201ENSMUST00000225224 253 ntBASIC5.78□□□□□ -1.48
RaraP11416 AC154328.1-201ENSMUST00000225875 307 ntBASIC5.78□□□□□ -1.48
RaraP11416 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RaraP11416 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RaraP11416 Snord68-201ENSMUST00000082516 86 ntBASIC5.78□□□□□ -1.48
RaraP11416 Gm23460-201ENSMUST00000083258 109 ntBASIC5.78□□□□□ -1.48
RaraP11416 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
RaraP11416 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.78□□□□□ -1.48
RaraP11416 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RaraP11416 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.78□□□□□ -1.48
RaraP11416 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RaraP11416 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RaraP11416 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RaraP11416 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
RaraP11416 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.78□□□□□ -1.48
RaraP11416 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.77□□□□□ -1.48
RaraP11416 Olfr403-202ENSMUST00000206114 3444 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
RaraP11416 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.77□□□□□ -1.49
RaraP11416 Gm23744-201ENSMUST00000104231 149 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm7164-201ENSMUST00000117503 450 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm11737-201ENSMUST00000118713 468 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm11794-201ENSMUST00000119446 237 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm14428-201ENSMUST00000120408 822 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm12482-201ENSMUST00000120435 630 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Gm25846-201ENSMUST00000158013 135 ntBASIC5.77□□□□□ -1.49
RaraP11416 Scarna13-201ENSMUST00000158164 275 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm22383-201ENSMUST00000158188 327 ntBASIC5.77□□□□□ -1.49
RaraP11416 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.77□□□□□ -1.49
RaraP11416 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RaraP11416 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.77□□□□□ -1.49
RaraP11416 Mir7037-201ENSMUST00000184414 65 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm28781-201ENSMUST00000185760 696 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm29307-201ENSMUST00000187367 696 ntBASIC5.77□□□□□ -1.49
RaraP11416 Gm29339-201ENSMUST00000189613 696 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms