Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm46194-201ENSMUST00000218136 320 ntBASIC4.22□□□□□ -1.73
Lire1P11260 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC4.22□□□□□ -1.73
Lire1P11260 AL645546.2-201ENSMUST00000224526 265 ntBASIC4.22□□□□□ -1.73
Lire1P11260 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Lire1P11260 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Lire1P11260 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.22□□□□□ -1.73
Lire1P11260 Gm18913-201ENSMUST00000204311 1789 ntBASIC4.22□□□□□ -1.73
Lire1P11260 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Lire1P11260 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC4.21□□□□□ -1.73
Lire1P11260 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Lire1P11260 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
Lire1P11260 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lire1P11260 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lire1P11260 Gm12509-201ENSMUST00000118033 609 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Gm13228-201ENSMUST00000118937 634 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Gm13737-201ENSMUST00000119793 232 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Gm13867-201ENSMUST00000120844 395 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Gm16471-201ENSMUST00000121940 618 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
Lire1P11260 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lire1P11260 Gm25427-201ENSMUST00000157605 103 ntBASIC4.21□□□□□ -1.74
Lire1P11260 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lire1P11260 Gm20542-201ENSMUST00000174582 372 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Lire1P11260 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC4.21□□□□□ -1.74
Lire1P11260 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC4.21□□□□□ -1.74
Lire1P11260 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.21□□□□□ -1.74
Lire1P11260 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.21□□□□□ -1.74
Lire1P11260 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Gm19908-201ENSMUST00000204684 391 ntBASIC4.21□□□□□ -1.74
Lire1P11260 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.21□□□□□ -1.74
Lire1P11260 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lire1P11260 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Lire1P11260 Olfr844-201ENSMUST00000054106 930 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Lire1P11260 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
Lire1P11260 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
Lire1P11260 Gm37099-201ENSMUST00000191902 3451 ntBASIC4.21□□□□□ -1.74
Lire1P11260 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Lire1P11260 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Lire1P11260 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Mir294-201ENSMUST00000104710 84 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Mir208b-201ENSMUST00000104735 77 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm13379-201ENSMUST00000118053 621 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm14753-201ENSMUST00000118503 246 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm16106-201ENSMUST00000119187 294 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm15387-201ENSMUST00000120421 648 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm14122-201ENSMUST00000122076 973 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC4.2□□□□□ -1.74
Lire1P11260 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC4.2□□□□□ -1.74
Lire1P11260 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC4.2□□□□□ -1.74
Lire1P11260 Gm24773-201ENSMUST00000158513 99 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm16558-201ENSMUST00000163015 532 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Lire1P11260 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC4.2□□□□□ -1.74
Lire1P11260 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Lire1P11260 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm27568-201ENSMUST00000184220 99 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm37164-201ENSMUST00000192809 637 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm43829-201ENSMUST00000196191 3802 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.2□□□□□ -1.74
Lire1P11260 Gm45007-201ENSMUST00000206237 366 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC4.2□□□□□ -1.74
Lire1P11260 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC4.2□□□□□ -1.74
Lire1P11260 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.2□□□□□ -1.74
Lire1P11260 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC4.2□□□□□ -1.74
Lire1P11260 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Lire1P11260 Gm8942-201ENSMUST00000217892 400 ntBASIC4.2□□□□□ -1.74
Lire1P11260 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Lire1P11260 Gm5518-201ENSMUST00000084171 648 ntBASIC4.2□□□□□ -1.74
Lire1P11260 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Lire1P11260 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
Lire1P11260 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC4.19□□□□□ -1.74
Lire1P11260 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Lire1P11260 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Lire1P11260 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Lire1P11260 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
Lire1P11260 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Lire1P11260 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Lire1P11260 Gm25560-201ENSMUST00000104606 176 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm11898-201ENSMUST00000117161 385 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm13678-201ENSMUST00000118926 340 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm9308-201ENSMUST00000119073 448 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm12137-201ENSMUST00000119565 346 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm8051-201ENSMUST00000120464 466 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm16363-201ENSMUST00000132460 877 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
Lire1P11260 Gm16250-201ENSMUST00000148974 256 ntBASIC4.19□□□□□ -1.74
Lire1P11260 Gm25341-201ENSMUST00000157461 268 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms