Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col1a1P11087 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col1a1P11087 Gm15021-201ENSMUST00000117832 742 ntBASIC4□□□□□ -1.77
Col1a1P11087 Gm23380-201ENSMUST00000158448 103 ntBASIC4□□□□□ -1.77
Col1a1P11087 Gm4207-201ENSMUST00000173144 960 ntBASIC4□□□□□ -1.77
Col1a1P11087 Gm26866-201ENSMUST00000180414 802 ntBASIC4□□□□□ -1.77
Col1a1P11087 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Col1a1P11087 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC4□□□□□ -1.77
Col1a1P11087 Gm38088-201ENSMUST00000195829 241 ntBASIC4□□□□□ -1.77
Col1a1P11087 Gm43214-201ENSMUST00000199242 352 ntBASIC4□□□□□ -1.77
Col1a1P11087 AC126253.2-201ENSMUST00000226518 205 ntBASIC4□□□□□ -1.77
Col1a1P11087 AC164597.2-201ENSMUST00000226738 603 ntBASIC4□□□□□ -1.77
Col1a1P11087 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col1a1P11087 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col1a1P11087 Mir504-201ENSMUST00000093602 79 ntBASIC4□□□□□ -1.77
Col1a1P11087 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col1a1P11087 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col1a1P11087 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col1a1P11087 Gm43010-201ENSMUST00000195993 2878 ntBASIC4□□□□□ -1.77
Col1a1P11087 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col1a1P11087 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col1a1P11087 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col1a1P11087 Neat1-201ENSMUST00000173672 20771 ntBASIC4□□□□□ -1.77
Col1a1P11087 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col1a1P11087 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Gm14463-201ENSMUST00000121117 498 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC3.99□□□□□ -1.77
Col1a1P11087 Gm23592-201ENSMUST00000157859 117 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Gm25373-201ENSMUST00000158156 115 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Gm26215-201ENSMUST00000158584 139 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Gm3123-201ENSMUST00000163480 480 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Gm21960-201ENSMUST00000181924 452 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Gm43651-201ENSMUST00000199796 439 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.99□□□□□ -1.77
Col1a1P11087 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col1a1P11087 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col1a1P11087 Trhr-202ENSMUST00000110289 1745 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
Col1a1P11087 Gm6545-201ENSMUST00000217186 1786 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Gm43443-201ENSMUST00000202337 2393 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col1a1P11087 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.99□□□□□ -1.77
Col1a1P11087 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
Col1a1P11087 Gm7876-202ENSMUST00000171305 1758 ntAPPRIS P5 TSL 5 BASIC3.99□□□□□ -1.77
Col1a1P11087 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Col1a1P11087 Mir711-201ENSMUST00000102188 82 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm22939-201ENSMUST00000103958 131 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm13502-201ENSMUST00000121574 684 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm14389-201ENSMUST00000140453 241 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col1a1P11087 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.98□□□□□ -1.77
Col1a1P11087 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col1a1P11087 n-R5s86-201ENSMUST00000083215 119 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
Col1a1P11087 Olfr477-201ENSMUST00000091605 933 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col1a1P11087 Chl1-201ENSMUST00000066905 7562 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm9314-201ENSMUST00000199881 1528 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Col1a1P11087 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col1a1P11087 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm16420-201ENSMUST00000120258 856 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm14162-201ENSMUST00000121985 601 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm13180-201ENSMUST00000141222 440 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm13411-201ENSMUST00000149429 414 ntTSL 2 BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm23402-201ENSMUST00000178130 107 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm28785-201ENSMUST00000187478 379 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm25203-202ENSMUST00000200458 216 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Gm6841-201ENSMUST00000220602 598 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Olfr147-201ENSMUST00000056364 1166 ntAPPRIS P2 TSL 2 BASIC3.98□□□□□ -1.77
Col1a1P11087 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.98□□□□□ -1.77
Col1a1P11087 Gm25203-201ENSMUST00000082842 215 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 AC160130.1-201ENSMUST00000220734 2735 ntBASIC3.98□□□□□ -1.77
Col1a1P11087 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Col1a1P11087 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Col1a1P11087 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
Col1a1P11087 Mir1198-201ENSMUST00000116995 121 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.97□□□□□ -1.77
Col1a1P11087 Gm12793-201ENSMUST00000119268 292 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Gm11830-201ENSMUST00000120175 561 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Gm13692-201ENSMUST00000120774 371 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Gm14810-201ENSMUST00000121628 486 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Col1a1P11087 Gm26214-201ENSMUST00000158581 107 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Gm29062-201ENSMUST00000186032 694 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Gm29259-201ENSMUST00000186396 694 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Gm28255-201ENSMUST00000187101 694 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Gm29545-201ENSMUST00000188878 694 ntBASIC3.97□□□□□ -1.77
Col1a1P11087 Gm28358-202ENSMUST00000189292 223 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms