Protein–RNA interactions for Protein: P04940

Ig kappa chain V-VI region NQ2-17.4.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04940 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC2.93□□□□□ -1.94
P04940 Gm23385-201ENSMUST00000158592 295 ntBASIC2.93□□□□□ -1.94
P04940 Gm26362-201ENSMUST00000158865 315 ntBASIC2.93□□□□□ -1.94
P04940 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
P04940 Gm37837-201ENSMUST00000191743 604 ntBASIC2.93□□□□□ -1.94
P04940 Gm37239-201ENSMUST00000193510 141 ntBASIC2.93□□□□□ -1.94
P04940 Gm19080-201ENSMUST00000196082 550 ntBASIC2.93□□□□□ -1.94
P04940 Gm43049-202ENSMUST00000198942 559 ntTSL 2 BASIC2.93□□□□□ -1.94
P04940 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC2.93□□□□□ -1.94
P04940 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC2.93□□□□□ -1.94
P04940 Gm34005-201ENSMUST00000215834 282 ntBASIC2.93□□□□□ -1.94
P04940 AC156559.1-201ENSMUST00000224158 222 ntBASIC2.93□□□□□ -1.94
P04940 AC140368.1-202ENSMUST00000226131 658 ntBASIC2.93□□□□□ -1.94
P04940 AC140209.1-201ENSMUST00000227875 284 ntBASIC2.93□□□□□ -1.94
P04940 AC074315.1-201ENSMUST00000228801 214 ntBASIC2.93□□□□□ -1.94
P04940 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
P04940 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC2.93□□□□□ -1.94
P04940 Vmn1r203-201ENSMUST00000091729 936 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
P04940 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
P04940 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
P04940 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
P04940 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
P04940 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
P04940 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
P04940 Gm38265-201ENSMUST00000193479 3766 ntBASIC2.92□□□□□ -1.94
P04940 Hyal6-201ENSMUST00000031690 3452 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
P04940 Gm18913-201ENSMUST00000204311 1789 ntBASIC2.92□□□□□ -1.94
P04940 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
P04940 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
P04940 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
P04940 Gm37626-201ENSMUST00000194332 4563 ntBASIC2.92□□□□□ -1.94
P04940 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC2.92□□□□□ -1.94
P04940 Gm6893-201ENSMUST00000118385 522 ntBASIC2.92□□□□□ -1.94
P04940 Gm15268-201ENSMUST00000118845 352 ntBASIC2.92□□□□□ -1.94
P04940 Gm16005-201ENSMUST00000120515 269 ntBASIC2.92□□□□□ -1.94
P04940 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC2.92□□□□□ -1.94
P04940 Gm16471-201ENSMUST00000121940 618 ntBASIC2.92□□□□□ -1.94
P04940 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC2.92□□□□□ -1.94
P04940 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC2.92□□□□□ -1.94
P04940 Gm25966-201ENSMUST00000157169 117 ntBASIC2.92□□□□□ -1.94
P04940 Gm23585-201ENSMUST00000157656 102 ntBASIC2.92□□□□□ -1.94
P04940 Gm26000-201ENSMUST00000157991 107 ntBASIC2.92□□□□□ -1.94
P04940 Gm23666-201ENSMUST00000158053 116 ntBASIC2.92□□□□□ -1.94
P04940 Gm20417-201ENSMUST00000174784 425 ntTSL 5 BASIC2.92□□□□□ -1.94
P04940 Gm22646-201ENSMUST00000175130 115 ntBASIC2.92□□□□□ -1.94
P04940 Gm21991-201ENSMUST00000180006 508 ntBASIC2.92□□□□□ -1.94
P04940 Gm29525-201ENSMUST00000189844 699 ntBASIC2.92□□□□□ -1.94
P04940 Gm29523-201ENSMUST00000191415 699 ntBASIC2.92□□□□□ -1.94
P04940 Gm42832-201ENSMUST00000196361 745 ntBASIC2.92□□□□□ -1.94
P04940 Gm44665-201ENSMUST00000205381 251 ntBASIC2.92□□□□□ -1.94
P04940 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC2.92□□□□□ -1.94
P04940 Gm18644-201ENSMUST00000211458 815 ntBASIC2.92□□□□□ -1.94
P04940 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.92□□□□□ -1.94
P04940 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC2.92□□□□□ -1.94
P04940 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC2.92□□□□□ -1.94
P04940 Gm4036-201ENSMUST00000220842 626 ntBASIC2.92□□□□□ -1.94
P04940 AC151907.1-201ENSMUST00000228812 412 ntBASIC2.92□□□□□ -1.94
P04940 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
P04940 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
P04940 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
P04940 Gm25581-201ENSMUST00000083410 164 ntBASIC2.92□□□□□ -1.94
P04940 Mir346-201ENSMUST00000083547 98 ntBASIC2.92□□□□□ -1.94
P04940 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
P04940 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
P04940 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
P04940 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
P04940 Gm43829-201ENSMUST00000196191 3802 ntBASIC2.92□□□□□ -1.94
P04940 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
P04940 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
P04940 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.91□□□□□ -1.94
P04940 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
P04940 Gm42537-201ENSMUST00000198260 2574 ntBASIC2.91□□□□□ -1.94
P04940 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
P04940 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
P04940 Gm37887-201ENSMUST00000192752 2716 ntBASIC2.91□□□□□ -1.94
P04940 Gm23063-201ENSMUST00000102350 93 ntBASIC2.91□□□□□ -1.94
P04940 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
P04940 Gm11433-201ENSMUST00000118318 228 ntBASIC2.91□□□□□ -1.94
P04940 Gm13314-201ENSMUST00000118742 335 ntBASIC2.91□□□□□ -1.94
P04940 Gm12118-201ENSMUST00000119766 532 ntBASIC2.91□□□□□ -1.94
P04940 Gm12001-201ENSMUST00000121727 913 ntBASIC2.91□□□□□ -1.94
P04940 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC2.91□□□□□ -1.94
P04940 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC2.91□□□□□ -1.94
P04940 Gm26276-201ENSMUST00000157099 109 ntBASIC2.91□□□□□ -1.94
P04940 Gm23540-201ENSMUST00000157543 164 ntBASIC2.91□□□□□ -1.94
P04940 Gm25438-201ENSMUST00000158281 110 ntBASIC2.91□□□□□ -1.94
P04940 Gm23179-201ENSMUST00000158693 304 ntBASIC2.91□□□□□ -1.94
P04940 Gm24739-201ENSMUST00000158855 292 ntBASIC2.91□□□□□ -1.94
P04940 Atp2b4-208ENSMUST00000167348 243 ntBASIC2.91□□□□□ -1.94
P04940 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.91□□□□□ -1.94
P04940 Gm18604-201ENSMUST00000172535 558 ntBASIC2.91□□□□□ -1.94
P04940 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
P04940 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
P04940 Gm28574-201ENSMUST00000185757 699 ntBASIC2.91□□□□□ -1.94
P04940 Gm28781-201ENSMUST00000185760 696 ntBASIC2.91□□□□□ -1.94
P04940 Gm28339-201ENSMUST00000185845 696 ntBASIC2.91□□□□□ -1.94
P04940 Gm28596-201ENSMUST00000185870 696 ntBASIC2.91□□□□□ -1.94
P04940 Gm29062-201ENSMUST00000186032 694 ntBASIC2.91□□□□□ -1.94
P04940 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
P04940 Gm29574-201ENSMUST00000186226 696 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms