Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm9732-202ENSMUST00000163912 1757 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
Col5a1O88207 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
Col5a1O88207 Gm12467-201ENSMUST00000117625 745 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Gm15377-201ENSMUST00000119594 246 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Gm26476-201ENSMUST00000122618 313 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col5a1O88207 Gm16327-201ENSMUST00000137146 228 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Gm18522-201ENSMUST00000173947 650 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Gm23402-201ENSMUST00000178130 107 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Gm44256-201ENSMUST00000203304 335 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Gm43932-201ENSMUST00000204499 52 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Col5a1O88207 Olfr926-201ENSMUST00000078289 1051 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col5a1O88207 Gm23615-201ENSMUST00000082602 65 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col5a1O88207 AC135119.1-201ENSMUST00000227935 3717 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Col5a1O88207 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col5a1O88207 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Col5a1O88207 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC3.24□□□□□ -1.89
Col5a1O88207 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC3.24□□□□□ -1.89
Col5a1O88207 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.24□□□□□ -1.89
Col5a1O88207 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Col5a1O88207 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Col5a1O88207 Mir680-3-201ENSMUST00000102298 87 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col5a1O88207 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.23□□□□□ -1.89
Col5a1O88207 Gm27532-201ENSMUST00000183726 113 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm37085-201ENSMUST00000193780 196 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm37288-201ENSMUST00000193963 334 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm18597-201ENSMUST00000209519 694 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC3.23□□□□□ -1.89
Col5a1O88207 AC129219.3-201ENSMUST00000223790 196 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm26449-201ENSMUST00000082452 104 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col5a1O88207 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col5a1O88207 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Col5a1O88207 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.23□□□□□ -1.89
Col5a1O88207 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col5a1O88207 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Col5a1O88207 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Col5a1O88207 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col5a1O88207 Traj7-201ENSMUST00000103733 59 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col5a1O88207 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Col5a1O88207 Gm14622-201ENSMUST00000117117 468 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm15074-201ENSMUST00000117603 936 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm9157-201ENSMUST00000117673 225 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Col5a1O88207 Gm24914-201ENSMUST00000157285 313 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm24019-201ENSMUST00000178620 107 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm26243-201ENSMUST00000179260 107 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm28094-201ENSMUST00000185262 390 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC3.23□□□□□ -1.89
Col5a1O88207 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.23□□□□□ -1.89
Col5a1O88207 Gm44869-201ENSMUST00000208836 357 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col5a1O88207 Gm23296-201ENSMUST00000082555 107 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Gm24859-201ENSMUST00000082729 107 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Col5a1O88207 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.23□□□□□ -1.89
Col5a1O88207 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
Col5a1O88207 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col5a1O88207 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col5a1O88207 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Col5a1O88207 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col5a1O88207 Gm26145-201ENSMUST00000104476 127 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC3.22□□□□□ -1.89
Col5a1O88207 Gm11913-201ENSMUST00000119094 336 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 Gm23958-201ENSMUST00000157207 105 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 Gm23668-201ENSMUST00000157465 111 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 Vmn1r-ps145-201ENSMUST00000175863 424 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 Gm29064-201ENSMUST00000187014 813 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC3.22□□□□□ -1.89
Col5a1O88207 Gm37900-201ENSMUST00000195510 3805 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Col5a1O88207 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col5a1O88207 AC139294.1-201ENSMUST00000226708 571 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 AC115291.1-201ENSMUST00000226803 258 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 AC080021.1-201ENSMUST00000228104 700 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col5a1O88207 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col5a1O88207 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Col5a1O88207 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
Col5a1O88207 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col5a1O88207 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Col5a1O88207 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col5a1O88207 Gm43923-201ENSMUST00000203992 2911 ntBASIC3.22□□□□□ -1.89
Col5a1O88207 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Col5a1O88207 AC160931.3-201ENSMUST00000222111 2267 ntBASIC3.21□□□□□ -1.89
Col5a1O88207 Gm12025-201ENSMUST00000117768 144 ntBASIC3.21□□□□□ -1.89
Col5a1O88207 Gm5762-201ENSMUST00000119204 258 ntBASIC3.21□□□□□ -1.89
Col5a1O88207 Gm14788-201ENSMUST00000119457 375 ntBASIC3.21□□□□□ -1.89
Col5a1O88207 Gm22034-201ENSMUST00000157283 134 ntBASIC3.21□□□□□ -1.89
Col5a1O88207 Gm22664-201ENSMUST00000158719 105 ntBASIC3.21□□□□□ -1.89
Col5a1O88207 Gm37575-201ENSMUST00000195467 309 ntBASIC3.21□□□□□ -1.89
Col5a1O88207 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC3.21□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms