Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm45160-201ENSMUST00000207112 3099 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm23424-201ENSMUST00000103889 110 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm11322-201ENSMUST00000118095 435 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm14753-201ENSMUST00000118503 246 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm14517-201ENSMUST00000119040 337 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm11822-201ENSMUST00000119177 415 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm7363-201ENSMUST00000119883 399 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm14655-201ENSMUST00000120124 578 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm13220-201ENSMUST00000121535 508 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm13363-201ENSMUST00000122008 522 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm9294-201ENSMUST00000165198 789 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm27148-201ENSMUST00000185086 160 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm8599-201ENSMUST00000193033 457 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm43941-201ENSMUST00000203303 1073 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm45590-201ENSMUST00000209715 262 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 AC156559.1-201ENSMUST00000224158 222 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 AC125399.1-201ENSMUST00000224236 595 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 AL606513.1-201ENSMUST00000225369 579 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 AC117588.3-201ENSMUST00000228517 325 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm5045-201ENSMUST00000027054 810 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm37400-201ENSMUST00000193148 3605 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm13340-201ENSMUST00000117219 1545 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Gm43443-201ENSMUST00000202337 2393 ntBASIC6.2□□□□□ -1.42
NpcdF8VQB8 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.19□□□□□ -1.42
NpcdF8VQB8 AW046200-203ENSMUST00000211787 2479 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm14292-201ENSMUST00000118761 456 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm15177-201ENSMUST00000120491 577 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm2020-201ENSMUST00000145242 579 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm24186-201ENSMUST00000157983 127 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm17081-201ENSMUST00000167363 478 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Rpl9-ps5-201ENSMUST00000174221 571 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm8807-201ENSMUST00000179328 492 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Mir6412-201ENSMUST00000184477 97 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 AC136146.1-201ENSMUST00000196180 91 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 4930584F24Rik-203ENSMUST00000197091 954 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm43494-201ENSMUST00000197672 388 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm45081-201ENSMUST00000206281 572 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC6.19□□□□□ -1.42
NpcdF8VQB8 AC159380.1-201ENSMUST00000218096 121 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 AC154224.1-201ENSMUST00000224367 403 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NpcdF8VQB8 n-R5s88-201ENSMUST00000083173 118 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.19□□□□□ -1.42
NpcdF8VQB8 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC6.19□□□□□ -1.42
NpcdF8VQB8 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.18□□□□□ -1.42
NpcdF8VQB8 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NpcdF8VQB8 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
NpcdF8VQB8 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
NpcdF8VQB8 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NpcdF8VQB8 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.18□□□□□ -1.42
NpcdF8VQB8 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NpcdF8VQB8 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
NpcdF8VQB8 Vmn2r88-202ENSMUST00000159674 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NpcdF8VQB8 Abcb11-201ENSMUST00000102709 5025 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
NpcdF8VQB8 AC159193.1-201ENSMUST00000222872 2517 ntBASIC6.18□□□□□ -1.42
NpcdF8VQB8 Gm14628-201ENSMUST00000117508 635 ntBASIC6.18□□□□□ -1.42
NpcdF8VQB8 Gm7657-201ENSMUST00000118851 666 ntBASIC6.18□□□□□ -1.42
NpcdF8VQB8 Gm14883-201ENSMUST00000120179 157 ntBASIC6.18□□□□□ -1.42
NpcdF8VQB8 Gm25784-201ENSMUST00000122524 81 ntBASIC6.18□□□□□ -1.42
NpcdF8VQB8 Gm25103-201ENSMUST00000122671 318 ntBASIC6.18□□□□□ -1.42
NpcdF8VQB8 Gm25334-201ENSMUST00000158036 110 ntBASIC6.18□□□□□ -1.42
NpcdF8VQB8 Gm24550-201ENSMUST00000158648 279 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms