Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Gm12311-201ENSMUST00000118803 374 ntBASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Gm17732-201ENSMUST00000163259 821 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Ighv1-78-201ENSMUST00000163670 294 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Gm27959-201ENSMUST00000185172 111 ntBASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Gm36371-201ENSMUST00000209043 1103 ntBASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Col6a3E9PWQ3 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 AC164297.4-201ENSMUST00000224225 1307 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Gm26297-201ENSMUST00000179464 132 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Gm37488-201ENSMUST00000195434 3374 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Gm11229-201ENSMUST00000121993 437 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Gm9377-201ENSMUST00000207227 623 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Gm22958-201ENSMUST00000122512 184 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 AC174776.1-201ENSMUST00000221509 405 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 AC174776.2-201ENSMUST00000222561 405 ntBASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC3.36□□□□□ -1.87
Col6a3E9PWQ3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Spag9-203ENSMUST00000075695 6910 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm12598-201ENSMUST00000117333 830 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm17954-201ENSMUST00000195893 607 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm19126-201ENSMUST00000207896 509 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm35857-201ENSMUST00000212739 178 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm18363-201ENSMUST00000221671 730 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm44822-201ENSMUST00000208559 6389 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Mir542-201ENSMUST00000102186 85 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm13831-201ENSMUST00000118764 302 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Ak9-201ENSMUST00000173494 6968 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Col6a3E9PWQ3 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Gm26396-201ENSMUST00000104093 132 ntBASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Gm17820-201ENSMUST00000220213 1068 ntBASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Gm336-201ENSMUST00000186376 1480 ntBASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Gm12760-201ENSMUST00000117861 482 ntBASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Gm14607-201ENSMUST00000119119 491 ntBASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Gm24976-201ENSMUST00000158972 135 ntBASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
Col6a3E9PWQ3 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Gm23950-201ENSMUST00000104026 129 ntBASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Mir466k-201ENSMUST00000116774 122 ntBASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Gm23775-201ENSMUST00000158991 249 ntBASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Gm28492-201ENSMUST00000190899 1019 ntBASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Gm44253-201ENSMUST00000203387 628 ntBASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Olfr906-201ENSMUST00000045493 936 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.88
Col6a3E9PWQ3 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 101 ms