Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm5963-201ENSMUST00000143451 236 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Mir3620-201ENSMUST00000184710 61 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm28471-201ENSMUST00000185994 615 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 4933402J10Rik-202ENSMUST00000198882 1167 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm43992-201ENSMUST00000204358 197 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm9373-201ENSMUST00000208724 599 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm44887-201ENSMUST00000208980 178 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm18194-201ENSMUST00000210455 481 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 AC153968.2-201ENSMUST00000215579 1140 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 AC137961.1-201ENSMUST00000227924 734 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm26165-201ENSMUST00000083791 138 ntBASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
H2afb2S4R1M3 Gm37176-201ENSMUST00000193300 4051 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm25765-201ENSMUST00000104100 132 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm15180-201ENSMUST00000117745 492 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm14753-201ENSMUST00000118503 246 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm11708-201ENSMUST00000119530 832 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm7219-201ENSMUST00000119619 297 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm14991-201ENSMUST00000119913 598 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm12587-201ENSMUST00000120180 427 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm23587-201ENSMUST00000157658 84 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Samd15-201ENSMUST00000169669 1194 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm20693-201ENSMUST00000177431 211 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm21070-201ENSMUST00000182425 985 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm6140-201ENSMUST00000192494 966 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm18843-201ENSMUST00000194982 719 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm44387-201ENSMUST00000196298 145 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm44395-201ENSMUST00000197056 153 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm42453-201ENSMUST00000200477 409 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm45690-201ENSMUST00000210775 246 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm19540-201ENSMUST00000221843 810 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 AC102815.1-201ENSMUST00000226662 1061 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 CT025525.3-201ENSMUST00000228858 366 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm25800-201ENSMUST00000082636 134 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm42728-201ENSMUST00000202644 1552 ntBASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm14781-201ENSMUST00000078469 1360 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC3.75□□□□□ -1.81
H2afb2S4R1M3 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Gm24125-201ENSMUST00000104105 137 ntBASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Gm24340-201ENSMUST00000104208 97 ntBASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Gm11393-201ENSMUST00000118019 288 ntBASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Gm12873-201ENSMUST00000119988 422 ntBASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Gm12880-201ENSMUST00000120652 494 ntBASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Gm13788-201ENSMUST00000120767 601 ntBASIC3.74□□□□□ -1.81
H2afb2S4R1M3 Gm22204-201ENSMUST00000122654 327 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms