Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Hba-ps4-201ENSMUST00000128900 447 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm24690-201ENSMUST00000157759 97 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm25520-201ENSMUST00000158389 118 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm17177-201ENSMUST00000169144 483 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Mir3473f-201ENSMUST00000183743 136 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm8676-201ENSMUST00000184206 637 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm29550-201ENSMUST00000185543 285 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm29299-201ENSMUST00000185609 923 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm28974-201ENSMUST00000187893 231 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm29573-201ENSMUST00000190291 919 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm38146-201ENSMUST00000194121 1293 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm37167-201ENSMUST00000194946 396 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm43171-201ENSMUST00000199882 291 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm3565-201ENSMUST00000222670 609 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Ear-ps9-202ENSMUST00000226796 245 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Samt4-201ENSMUST00000026029 963 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Mir421-201ENSMUST00000083575 76 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gm23875-201ENSMUST00000083711 318 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.28□□□□□ -1.56
Ushbp1Q8R370 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
Ushbp1Q8R370 AC159188.2-201ENSMUST00000224103 1301 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm23014-201ENSMUST00000104144 130 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Mir208b-201ENSMUST00000104735 77 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm22072-201ENSMUST00000116850 121 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm15333-201ENSMUST00000118825 364 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm15206-201ENSMUST00000119143 454 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm14887-201ENSMUST00000119522 663 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm14037-201ENSMUST00000120576 313 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm22383-201ENSMUST00000158188 327 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Gm23824-201ENSMUST00000158741 276 ntBASIC5.27□□□□□ -1.57
Ushbp1Q8R370 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 95.1 ms