Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm2182-201ENSMUST00000145243 663 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm5974-201ENSMUST00000181607 986 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm26915-201ENSMUST00000183080 748 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Mir6938-201ENSMUST00000184173 63 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm33571-201ENSMUST00000193271 657 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm7897-201ENSMUST00000193981 554 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm21006-201ENSMUST00000196930 667 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm43825-201ENSMUST00000199650 734 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 6030400A10Rik-201ENSMUST00000199734 1212 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm25004-201ENSMUST00000083811 161 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Oog1-201ENSMUST00000095509 1801 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 AC155921.1-201ENSMUST00000216568 3841 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Gm37936-201ENSMUST00000194647 1322 ntBASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Nup88Q8CEC0 Senp8-203ENSMUST00000177963 3792 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm25420-201ENSMUST00000104216 127 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm11874-201ENSMUST00000117437 130 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm11931-201ENSMUST00000121630 447 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm13676-201ENSMUST00000122185 591 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm14473-201ENSMUST00000122269 557 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm23499-201ENSMUST00000157736 268 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm24850-201ENSMUST00000158029 119 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm15974-201ENSMUST00000159103 531 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm25120-201ENSMUST00000180148 79 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Rian-211ENSMUST00000182737 699 ntTSL 3 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm29105-201ENSMUST00000187256 450 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm19774-201ENSMUST00000190667 114 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm18340-201ENSMUST00000196342 609 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm42474-201ENSMUST00000201073 505 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 AC156504.1-201ENSMUST00000214608 157 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm17872-201ENSMUST00000222550 532 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 AC124562.1-201ENSMUST00000224673 337 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm26449-201ENSMUST00000082452 104 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm43594-201ENSMUST00000201153 3442 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 AC153881.3-201ENSMUST00000218494 1561 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Nup88Q8CEC0 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.67□□□□□ -1.66
Nup88Q8CEC0 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm13230-201ENSMUST00000120870 1575 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm29114-201ENSMUST00000187100 2508 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm14816-201ENSMUST00000117174 294 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm11406-201ENSMUST00000117418 484 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm12261-201ENSMUST00000117499 645 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm11673-201ENSMUST00000117846 331 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm15263-201ENSMUST00000121556 642 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm12755-201ENSMUST00000122297 282 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Hba-ps4-201ENSMUST00000128900 447 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm23098-201ENSMUST00000157552 299 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm9587-201ENSMUST00000172449 454 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm25817-201ENSMUST00000177758 121 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm24766-201ENSMUST00000179182 121 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm28267-201ENSMUST00000191093 265 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm37495-201ENSMUST00000194590 264 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm8820-201ENSMUST00000204077 571 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 Gm19599-201ENSMUST00000218898 358 ntBASIC4.67□□□□□ -1.66
Nup88Q8CEC0 AC134335.1-201ENSMUST00000227626 329 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms