Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Gm19131-201ENSMUST00000203408 789 ntBASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Gm44449-201ENSMUST00000203610 153 ntBASIC5.23□□□□□ -1.57
Vps53Q8CCB4 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Vps53Q8CCB4 AC166830.1-201ENSMUST00000224201 533 ntBASIC5.23□□□□□ -1.57
Vps53Q8CCB4 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.23□□□□□ -1.57
Vps53Q8CCB4 CT573086.3-201ENSMUST00000228762 594 ntBASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Gm26176-201ENSMUST00000083795 105 ntBASIC5.23□□□□□ -1.57
Vps53Q8CCB4 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Ssxb3-202ENSMUST00000089379 604 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Gm16332-201ENSMUST00000134229 2967 ntBASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Vps53Q8CCB4 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm37625-201ENSMUST00000194969 4872 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Traj11-201ENSMUST00000103730 59 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm7363-201ENSMUST00000119883 399 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm12825-201ENSMUST00000120249 563 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm5391-201ENSMUST00000121155 613 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm2165-201ENSMUST00000124609 1118 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm14553-201ENSMUST00000126711 1118 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm2101-204ENSMUST00000137421 1118 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm3669-205ENSMUST00000144018 1118 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm23496-201ENSMUST00000157741 248 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm24751-201ENSMUST00000157844 102 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm26362-201ENSMUST00000158865 315 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm7346-201ENSMUST00000169661 476 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm29668-201ENSMUST00000187802 315 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm9632-201ENSMUST00000195934 643 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm44376-201ENSMUST00000197570 128 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm29793-201ENSMUST00000202874 460 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm7946-201ENSMUST00000203326 958 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm18462-201ENSMUST00000208112 417 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm45839-201ENSMUST00000209884 399 ntTSL 5 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm18258-201ENSMUST00000210413 542 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm19599-201ENSMUST00000218898 358 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 AC154305.1-201ENSMUST00000224443 450 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 AL589742.1-201ENSMUST00000226034 349 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 AC147628.1-201ENSMUST00000228193 688 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm25135-201ENSMUST00000082648 143 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm24921-201ENSMUST00000083024 107 ntBASIC5.22□□□□□ -1.57
Vps53Q8CCB4 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Vps53Q8CCB4 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Vps53Q8CCB4 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Zfp300-201ENSMUST00000040667 4634 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm15176-201ENSMUST00000117734 135 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm7421-201ENSMUST00000119298 639 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm12994-201ENSMUST00000119601 447 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm7365-201ENSMUST00000120877 639 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm22613-201ENSMUST00000122679 292 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm5963-201ENSMUST00000143451 236 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm22646-201ENSMUST00000175130 115 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm29556-201ENSMUST00000187591 696 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm28974-201ENSMUST00000187893 231 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm28997-201ENSMUST00000188759 429 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm29920-201ENSMUST00000206876 754 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 Gm44879-201ENSMUST00000207007 503 ntBASIC5.21□□□□□ -1.58
Vps53Q8CCB4 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms