Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm20660-201ENSMUST00000177515 289 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm4617-201ENSMUST00000178993 331 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm26928-201ENSMUST00000182674 572 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm27636-201ENSMUST00000184528 122 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm43393-201ENSMUST00000200147 194 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm5110-201ENSMUST00000203122 1063 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm45105-201ENSMUST00000207824 397 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Gm44811-201ENSMUST00000209120 228 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 AC153800.1-201ENSMUST00000219212 365 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 AL606513.1-201ENSMUST00000225369 579 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 AC125405.1-201ENSMUST00000226406 589 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 AC113269.1-201ENSMUST00000227185 674 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 AC121870.1-201ENSMUST00000216279 4879 ntBASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim47Q8C0E3 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC6.27□□□□□ -1.4
Trim47Q8C0E3 Gm21379-201ENSMUST00000179772 1955 ntBASIC6.27□□□□□ -1.4
Trim47Q8C0E3 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Tmprss11a-201ENSMUST00000101073 2657 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm42662-201ENSMUST00000202539 1431 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm14933-201ENSMUST00000118840 481 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm14876-201ENSMUST00000120795 327 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm15786-201ENSMUST00000121079 450 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm14559-201ENSMUST00000121745 496 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm22843-201ENSMUST00000157710 134 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Mir1970-201ENSMUST00000157839 104 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm3170-201ENSMUST00000168753 850 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm22646-201ENSMUST00000175130 115 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Mir5128-201ENSMUST00000175217 84 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm24167-201ENSMUST00000177733 124 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm3348-201ENSMUST00000177813 850 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm24028-201ENSMUST00000178991 124 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm27028-201ENSMUST00000182303 399 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm19641-201ENSMUST00000188432 417 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm37757-201ENSMUST00000193072 210 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm43078-201ENSMUST00000197222 168 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Igkv15-102-201ENSMUST00000197885 287 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm44307-201ENSMUST00000204466 764 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm45313-201ENSMUST00000210584 178 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm35262-201ENSMUST00000215133 267 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 AC158641.1-201ENSMUST00000218933 229 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 CT572985.2-201ENSMUST00000220496 211 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm7822-201ENSMUST00000222433 581 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm22807-201ENSMUST00000082737 129 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm23686-201ENSMUST00000083241 164 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm44660-201ENSMUST00000207134 2465 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 C230085N15Rik-201ENSMUST00000194893 4327 ntBASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim47Q8C0E3 AC117769.3-201ENSMUST00000225814 1664 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm43891-201ENSMUST00000205132 3112 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Naip3-201ENSMUST00000118082 4208 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm15553-201ENSMUST00000118757 430 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm2005-201ENSMUST00000120759 542 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm13692-201ENSMUST00000120774 371 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm20415-201ENSMUST00000172877 423 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm23799-201ENSMUST00000175559 120 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Mir3090-201ENSMUST00000175597 87 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm14527-201ENSMUST00000179300 639 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm26731-201ENSMUST00000180683 543 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Mir6986-201ENSMUST00000184483 58 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 Gm27266-201ENSMUST00000184521 123 ntBASIC6.26□□□□□ -1.41
Trim47Q8C0E3 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms