Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm18775-201ENSMUST00000190763 586 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm37682-201ENSMUST00000191776 522 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm5983-201ENSMUST00000197739 770 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm2522-201ENSMUST00000204280 322 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm17780-201ENSMUST00000207142 612 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 CT030184.1-201ENSMUST00000222393 416 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm6988-201ENSMUST00000222676 375 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 AC164297.5-201ENSMUST00000224365 198 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Mecom-201ENSMUST00000061088 348 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Mir338-201ENSMUST00000083666 98 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 AC153969.1-201ENSMUST00000214047 2605 ntBASIC4.54□□□□□ -1.68
Ubfd1Q78JW9 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm16431-201ENSMUST00000117454 431 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm12994-201ENSMUST00000119601 447 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm2318-201ENSMUST00000119623 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm2768-201ENSMUST00000121062 250 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm6591-201ENSMUST00000121063 434 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm3030-201ENSMUST00000163410 516 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm17030-201ENSMUST00000167016 393 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm3111-201ENSMUST00000167426 490 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm7438-201ENSMUST00000177664 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm7408-201ENSMUST00000178014 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm7386-201ENSMUST00000178020 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm3657-201ENSMUST00000178170 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm7415-201ENSMUST00000178205 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm7398-201ENSMUST00000178589 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm7391-201ENSMUST00000178680 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm7375-201ENSMUST00000179232 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm3681-201ENSMUST00000179940 639 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm37836-201ENSMUST00000195875 175 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 4930428D20Rik-201ENSMUST00000201886 546 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm29793-201ENSMUST00000202874 460 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm7786-201ENSMUST00000210494 436 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 AL772265.1-201ENSMUST00000214379 305 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm5917-201ENSMUST00000217638 721 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Apoo-ps-201ENSMUST00000061241 586 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm23302-201ENSMUST00000082710 100 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm22293-201ENSMUST00000083314 109 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm6177-201ENSMUST00000085589 465 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ubfd1Q78JW9 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.53□□□□□ -1.69
Ubfd1Q78JW9 Neat1-201ENSMUST00000173672 20771 ntBASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Ubfd1Q78JW9 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms