Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Gm44765-201ENSMUST00000206927 601 ntBASIC4.81□□□□□ -1.64
Usp49Q6P9L4 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Gm45016-201ENSMUST00000208375 396 ntTSL 3 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Gm39197-201ENSMUST00000212069 457 ntBASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Gm31931-201ENSMUST00000219666 222 ntBASIC4.81□□□□□ -1.64
Usp49Q6P9L4 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 AC154594.1-201ENSMUST00000225171 1273 ntBASIC4.81□□□□□ -1.64
Usp49Q6P9L4 CT573086.3-201ENSMUST00000228762 594 ntBASIC4.81□□□□□ -1.64
Usp49Q6P9L4 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Serpina6-201ENSMUST00000044159 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Usp49Q6P9L4 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Mir676-201ENSMUST00000102443 89 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Mir761-201ENSMUST00000103245 76 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Mir669o-201ENSMUST00000103898 96 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm15426-201ENSMUST00000117823 556 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm14238-201ENSMUST00000120227 323 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm11398-201ENSMUST00000120330 320 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm16100-201ENSMUST00000120489 231 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm25292-201ENSMUST00000122797 322 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm24939-201ENSMUST00000158325 137 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm6395-201ENSMUST00000167639 691 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm22367-201ENSMUST00000178930 132 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm29073-201ENSMUST00000185563 664 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm29165-201ENSMUST00000190655 664 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm29211-201ENSMUST00000191470 664 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm43710-201ENSMUST00000199583 452 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm17737-201ENSMUST00000210183 1147 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm45710-201ENSMUST00000212847 215 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 AC150560.2-201ENSMUST00000227208 171 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Usp49Q6P9L4 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm14929-201ENSMUST00000152079 1850 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Mir1193-201ENSMUST00000116761 121 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm13737-201ENSMUST00000119793 232 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm11896-201ENSMUST00000121105 820 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm14916-201ENSMUST00000121904 204 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm12762-201ENSMUST00000140881 483 ntTSL 2 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm13773-201ENSMUST00000156693 583 ntTSL 3 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm23902-201ENSMUST00000157571 134 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm25224-201ENSMUST00000158195 68 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Trbv10-201ENSMUST00000168322 289 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm27414-201ENSMUST00000185033 381 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm29148-201ENSMUST00000188140 336 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm37501-201ENSMUST00000192830 691 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm7142-201ENSMUST00000194232 586 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm43370-201ENSMUST00000196437 284 ntBASIC4.79□□□□□ -1.64
Usp49Q6P9L4 Gm42830-201ENSMUST00000196642 313 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms