Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm8734-201ENSMUST00000211669 1312 ntBASIC4.69□□□□□ -1.66
CtcfQ61164 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CtcfQ61164 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC4.68□□□□□ -1.66
CtcfQ61164 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CtcfQ61164 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
CtcfQ61164 Gm24469-201ENSMUST00000104487 131 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm11633-201ENSMUST00000118176 444 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm14714-201ENSMUST00000119743 439 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 Gm6969-201ENSMUST00000140065 342 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC4.68□□□□□ -1.66
CtcfQ61164 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.68□□□□□ -1.66
CtcfQ61164 Gm22143-201ENSMUST00000157401 203 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm2389-201ENSMUST00000160487 189 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm9587-201ENSMUST00000172449 454 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CtcfQ61164 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC4.68□□□□□ -1.66
CtcfQ61164 Gm43028-201ENSMUST00000202561 481 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm18855-201ENSMUST00000206689 570 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm9373-201ENSMUST00000208724 599 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 AC156795.1-201ENSMUST00000214655 414 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC4.68□□□□□ -1.66
CtcfQ61164 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.68□□□□□ -1.66
CtcfQ61164 AC124569.4-201ENSMUST00000223830 1220 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 CT009733.1-201ENSMUST00000225322 425 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 AC124549.1-201ENSMUST00000225912 333 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 Senp7-201ENSMUST00000049128 1190 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Gm6982-201ENSMUST00000118752 1560 ntBASIC4.68□□□□□ -1.66
CtcfQ61164 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CtcfQ61164 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CtcfQ61164 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 2410012E07Rik-201ENSMUST00000190896 1357 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CtcfQ61164 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm23879-201ENSMUST00000116874 126 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm12237-201ENSMUST00000120158 470 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Clec2f-201ENSMUST00000121051 374 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm15077-201ENSMUST00000122344 362 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC4.67□□□□□ -1.66
CtcfQ61164 Gm3362-201ENSMUST00000148102 466 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.67□□□□□ -1.66
CtcfQ61164 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC4.67□□□□□ -1.66
CtcfQ61164 Gm5263-201ENSMUST00000163646 601 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm17194-201ENSMUST00000164610 348 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm22177-201ENSMUST00000175002 158 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm29576-201ENSMUST00000188020 678 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm28113-201ENSMUST00000188280 229 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm17777-201ENSMUST00000189740 1276 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm28354-201ENSMUST00000190904 678 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm4501-201ENSMUST00000207330 551 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.67□□□□□ -1.66
CtcfQ61164 Gm4558-201ENSMUST00000207886 521 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm4528-201ENSMUST00000207905 551 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC4.67□□□□□ -1.66
CtcfQ61164 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 Gm8158-201ENSMUST00000219220 465 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm8112-201ENSMUST00000219637 465 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CtcfQ61164 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC4.67□□□□□ -1.66
CtcfQ61164 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CtcfQ61164 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CtcfQ61164 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 Olfr776-201ENSMUST00000073704 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CtcfQ61164 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Gm22578-201ENSMUST00000083730 107 ntBASIC4.67□□□□□ -1.66
CtcfQ61164 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CtcfQ61164 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CtcfQ61164 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CtcfQ61164 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CtcfQ61164 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
CtcfQ61164 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CtcfQ61164 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CtcfQ61164 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.66□□□□□ -1.66
CtcfQ61164 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CtcfQ61164 Gm13932-201ENSMUST00000120873 610 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms