Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm28596-201ENSMUST00000185870 696 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm8600-201ENSMUST00000186320 905 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm5829-201ENSMUST00000191383 351 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm32295-201ENSMUST00000192558 696 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm31260-201ENSMUST00000193478 696 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm43369-201ENSMUST00000196373 1552 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm2314-201ENSMUST00000200391 586 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm42926-201ENSMUST00000200496 697 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm44871-201ENSMUST00000207821 497 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 AC139638.1-201ENSMUST00000218027 364 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Snora31-201ENSMUST00000083213 130 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Snord15a-201ENSMUST00000083888 148 ntBASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Upf3bQ3ULL6 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Upf3bQ3ULL6 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Upf3bQ3ULL6 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Upf3bQ3ULL6 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Upf3bQ3ULL6 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Upf3bQ3ULL6 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm16005-201ENSMUST00000120515 269 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm5123-201ENSMUST00000121905 837 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Hba-ps4-201ENSMUST00000128900 447 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm5755-201ENSMUST00000152394 837 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm22840-201ENSMUST00000158444 136 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm27392-201ENSMUST00000185041 101 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm37603-201ENSMUST00000192368 219 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm37617-201ENSMUST00000194309 159 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm38334-201ENSMUST00000195060 313 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm42526-201ENSMUST00000198956 393 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm8231-201ENSMUST00000221617 783 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm24950-201ENSMUST00000082768 191 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm23971-201ENSMUST00000083317 191 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm23849-201ENSMUST00000083833 191 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm26316-201ENSMUST00000083886 191 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Gm13974-201ENSMUST00000144368 1454 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.9□□□□□ -1.79
Upf3bQ3ULL6 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm13972-201ENSMUST00000153726 3164 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm12448-201ENSMUST00000118852 655 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm11385-201ENSMUST00000121513 570 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm17153-201ENSMUST00000171314 490 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm27903-201ENSMUST00000175482 126 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm28010-201ENSMUST00000179485 126 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 1700010H22Rik-202ENSMUST00000187592 1003 ntTSL 5 BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm19280-201ENSMUST00000190191 205 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm38053-201ENSMUST00000193938 160 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm36382-201ENSMUST00000198892 541 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm6230-201ENSMUST00000208077 780 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm35857-201ENSMUST00000212739 178 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm12582-201ENSMUST00000030555 697 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Gm24917-201ENSMUST00000083935 104 ntBASIC3.89□□□□□ -1.79
Upf3bQ3ULL6 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms