Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3aQ3ULJ3 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3aQ3ULJ3 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3aQ3ULJ3 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Upf3aQ3ULJ3 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upf3aQ3ULJ3 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 AC163296.2-201ENSMUST00000220177 1315 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm38065-201ENSMUST00000193147 3492 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 AC156560.3-201ENSMUST00000222978 3841 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm22472-201ENSMUST00000104115 134 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm24376-201ENSMUST00000104399 127 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm23322-201ENSMUST00000104464 167 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm13831-201ENSMUST00000118764 302 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm16005-201ENSMUST00000120515 269 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm24380-201ENSMUST00000122696 324 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Crem-231ENSMUST00000152108 654 ntTSL 5 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm18560-201ENSMUST00000173463 1123 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm23860-201ENSMUST00000179446 132 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm29320-201ENSMUST00000185235 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm29179-202ENSMUST00000186138 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm28598-201ENSMUST00000186490 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm29448-201ENSMUST00000186675 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm29314-201ENSMUST00000186800 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm28253-202ENSMUST00000187971 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm29268-201ENSMUST00000188669 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm5368-201ENSMUST00000189012 589 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm29169-201ENSMUST00000189835 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm29218-205ENSMUST00000190846 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm28978-201ENSMUST00000191120 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm37172-201ENSMUST00000191926 615 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm36934-201ENSMUST00000192007 306 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm18903-201ENSMUST00000215343 480 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 AC151907.1-201ENSMUST00000228812 412 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm22971-201ENSMUST00000083305 97 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Upf3aQ3ULJ3 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Upf3aQ3ULJ3 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.77
Upf3aQ3ULJ3 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm36927-201ENSMUST00000192504 1841 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm22497-201ENSMUST00000104499 131 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm4910-201ENSMUST00000119605 366 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm23326-201ENSMUST00000157419 105 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm4222-201ENSMUST00000165784 470 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm17153-201ENSMUST00000171314 490 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm21638-201ENSMUST00000179473 836 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm8641-201ENSMUST00000186995 826 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm28060-201ENSMUST00000191554 189 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm37934-201ENSMUST00000192902 402 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Igkv11-118-201ENSMUST00000199448 346 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm45080-201ENSMUST00000206648 283 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 AC158523.1-201ENSMUST00000221398 328 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 AC151902.1-201ENSMUST00000227800 375 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm22739-201ENSMUST00000083437 160 ntBASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Vmn1r81-201ENSMUST00000086232 921 ntAPPRIS P2 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Tas2r121-201ENSMUST00000095395 918 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Upf3aQ3ULJ3 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms