Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Hsfy2-201ENSMUST00000062085 1392 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Nkx3-1P97436 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm22497-201ENSMUST00000104499 131 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm14816-201ENSMUST00000117174 294 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm11673-201ENSMUST00000117846 331 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm15387-201ENSMUST00000120421 648 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm15860-202ENSMUST00000137257 506 ntTSL 3 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 2610001J05Rik-202ENSMUST00000155856 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm24441-201ENSMUST00000157235 281 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm23755-201ENSMUST00000157578 343 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx3-1P97436 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm22739-201ENSMUST00000083437 160 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm5518-201ENSMUST00000084171 648 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Gm45322-201ENSMUST00000211642 1361 ntBASIC3.19□□□□□ -1.9
Nkx3-1P97436 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nkx3-1P97436 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm3616-201ENSMUST00000174430 2514 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm17106-201ENSMUST00000105610 459 ntTSL 5 BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm13771-201ENSMUST00000117988 238 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm13314-201ENSMUST00000118742 335 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm11233-201ENSMUST00000122357 634 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm26141-201ENSMUST00000175299 126 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm23860-201ENSMUST00000179446 132 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nkx3-1P97436 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx3-1P97436 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm6680-201ENSMUST00000192789 950 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm42919-201ENSMUST00000197753 1284 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm43651-201ENSMUST00000199796 439 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm2189-201ENSMUST00000201419 429 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Nkx3-1P97436 AC073947.1-201ENSMUST00000216991 649 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC3.18□□□□□ -1.9
Nkx3-1P97436 AC124356.2-201ENSMUST00000221874 336 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 AC159263.3-201ENSMUST00000223434 460 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Olfr1465-201ENSMUST00000080142 924 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.18□□□□□ -1.9
Nkx3-1P97436 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Nkx3-1P97436 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 Mir673-201ENSMUST00000102361 91 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm15060-201ENSMUST00000119550 948 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm12358-201ENSMUST00000121842 520 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm23753-201ENSMUST00000157575 149 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm26001-201ENSMUST00000157989 103 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm17177-201ENSMUST00000169144 483 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm20693-201ENSMUST00000177431 211 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx3-1P97436 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm28591-201ENSMUST00000185259 183 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm29038-201ENSMUST00000191543 678 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm37698-201ENSMUST00000192605 463 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm38088-201ENSMUST00000195829 241 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm42824-201ENSMUST00000199361 247 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm42926-201ENSMUST00000200496 697 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 AC162376.1-201ENSMUST00000220120 435 ntBASIC3.17□□□□□ -1.9
Nkx3-1P97436 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nkx3-1P97436 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC3.17□□□□□ -1.9
Nkx3-1P97436 AC107369.1-201ENSMUST00000227373 860 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms