Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Gm27505-201ENSMUST00000185071 110 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 C530043A13Rik-201ENSMUST00000186453 550 ntTSL 3 BASIC2.38□□□□□ -2.03
PrkdcP97313 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Gm44523-201ENSMUST00000205616 417 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.38□□□□□ -2.03
PrkdcP97313 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC2.38□□□□□ -2.03
PrkdcP97313 Gm12571-201ENSMUST00000118132 243 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm11262-201ENSMUST00000119326 833 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm23048-201ENSMUST00000157237 129 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm27158-201ENSMUST00000183813 238 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm40155-201ENSMUST00000198291 818 ntTSL 3 BASIC2.37□□□□□ -2.03
PrkdcP97313 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PrkdcP97313 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm43826-201ENSMUST00000199604 2612 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm42909-201ENSMUST00000196982 3619 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PrkdcP97313 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PrkdcP97313 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
PrkdcP97313 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PrkdcP97313 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm13321-201ENSMUST00000117101 400 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm8600-201ENSMUST00000186320 905 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Gm6140-201ENSMUST00000192494 966 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PrkdcP97313 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
PrkdcP97313 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC2.37□□□□□ -2.03
PrkdcP97313 Gm28240-201ENSMUST00000187560 2053 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.37□□□□□ -2.03
PrkdcP97313 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 Gm29186-201ENSMUST00000189178 660 ntTSL 2 BASIC2.37□□□□□ -2.03
PrkdcP97313 Gm30534-201ENSMUST00000217928 207 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 AC153544.1-201ENSMUST00000217988 400 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 AC134864.1-201ENSMUST00000226326 511 ntBASIC2.37□□□□□ -2.03
PrkdcP97313 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC2.37□□□□□ -2.03
PrkdcP97313 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
PrkdcP97313 Gm12722-201ENSMUST00000118507 493 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PrkdcP97313 Olfr1318-201ENSMUST00000058176 1690 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PrkdcP97313 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm37930-201ENSMUST00000194308 1886 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm26027-201ENSMUST00000122725 268 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC2.36□□□□□ -2.03
PrkdcP97313 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm18617-201ENSMUST00000222311 259 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PrkdcP97313 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm14943-201ENSMUST00000118056 546 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Mir3965-201ENSMUST00000175570 69 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm27893-201ENSMUST00000184408 194 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm17967-201ENSMUST00000195319 647 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC2.36□□□□□ -2.03
PrkdcP97313 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PrkdcP97313 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm43705-201ENSMUST00000195958 3717 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
PrkdcP97313 Mapk10-212ENSMUST00000170792 7203 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PrkdcP97313 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PrkdcP97313 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm13650-201ENSMUST00000117729 433 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Svs4-201ENSMUST00000017142 731 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm28660-201ENSMUST00000186496 253 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Gm17777-201ENSMUST00000189740 1276 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Gm28924-201ENSMUST00000190012 241 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm34005-201ENSMUST00000215834 282 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.36□□□□□ -2.03
PrkdcP97313 Olfr798-201ENSMUST00000079810 936 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PrkdcP97313 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PrkdcP97313 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PrkdcP97313 Gm38374-201ENSMUST00000194417 2033 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
PrkdcP97313 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PrkdcP97313 Gm18719-201ENSMUST00000196696 1413 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.35□□□□□ -2.03
PrkdcP97313 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms